Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CXCL1P1-201ENST00000502804 216 ntBASIC14.43□□□□□ -0.1
TNFSF4P23510 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.43□□□□□ -0.1
TNFSF4P23510 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFSF4P23510 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.43□□□□□ -0.1
TNFSF4P23510 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.43□□□□□ -0.1
TNFSF4P23510 AC064836.3-201ENST00000607928 673 ntBASIC14.43□□□□□ -0.1
TNFSF4P23510 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFSF4P23510 AC007064.4-201ENST00000637740 555 ntBASIC14.43□□□□□ -0.1
TNFSF4P23510 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TNFSF4P23510 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TNFSF4P23510 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.43□□□□□ -0.1
TNFSF4P23510 AC002310.6-201ENST00000624451 1377 ntBASIC14.43□□□□□ -0.1
TNFSF4P23510 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.43□□□□□ -0.1
TNFSF4P23510 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TNFSF4P23510 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFSF4P23510 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TNFSF4P23510 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TNFSF4P23510 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TNFSF4P23510 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFSF4P23510 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFSF4P23510 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TNFSF4P23510 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TNFSF4P23510 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.42□□□□□ -0.1
TNFSF4P23510 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.42□□□□□ -0.1
TNFSF4P23510 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.42□□□□□ -0.1
TNFSF4P23510 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.42□□□□□ -0.1
TNFSF4P23510 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 AC005412.3-201ENST00000580309 715 ntBASIC14.42□□□□□ -0.1
TNFSF4P23510 AC140113.2-201ENST00000604370 208 ntBASIC14.42□□□□□ -0.1
TNFSF4P23510 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.42□□□□□ -0.1
TNFSF4P23510 AP001350.2-201ENST00000625104 1094 ntBASIC14.42□□□□□ -0.1
TNFSF4P23510 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 AC124067.4-201ENST00000519691 2379 ntBASIC14.42□□□□□ -0.1
TNFSF4P23510 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFSF4P23510 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TNFSF4P23510 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFSF4P23510 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TNFSF4P23510 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFSF4P23510 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFSF4P23510 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFSF4P23510 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TNFSF4P23510 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFSF4P23510 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
TNFSF4P23510 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFSF4P23510 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TNFSF4P23510 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFSF4P23510 HCG4B-203ENST00000450128 991 ntBASIC14.41□□□□□ -0.1
TNFSF4P23510 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TNFSF4P23510 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFSF4P23510 SLC25A6P2-201ENST00000497974 877 ntBASIC14.41□□□□□ -0.1
TNFSF4P23510 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFSF4P23510 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFSF4P23510 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFSF4P23510 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.41□□□□□ -0.1
TNFSF4P23510 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.41□□□□□ -0.1
TNFSF4P23510 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms