Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.392e-6■■□□□ 14.1
RPS3P23396 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.162e-6■■□□□ 14.1
RPS3P23396 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.162e-6■■□□□ 14.1
RPS3P23396 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.142e-6■■□□□ 14.1
RPS3P23396 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.052e-6■■□□□ 14.1
RPS3P23396 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.972e-6■■□□□ 14.1
RPS3P23396 TUSC2-204ENST00000454201 735 ntTSL 521.12■□□□□ 0.972e-6■■□□□ 14.1
RPS3P23396 SRSF9-206ENST00000603963 1043 ntTSL 520.97■□□□□ 0.952e-6■■□□□ 14.1
RPS3P23396 TFDP2-201ENST00000464782 640 ntTSL 420.86■□□□□ 0.932e-6■■□□□ 14.1
RPS3P23396 KIF1BP-210ENST00000637104 2285 ntTSL 520.7■□□□□ 0.92e-6■■□□□ 14.1
RPS3P23396 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.832e-6■■□□□ 14.1
RPS3P23396 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.17■□□□□ 0.822e-6■■□□□ 14.1
RPS3P23396 HDGF-205ENST00000469145 844 ntTSL 220.03■□□□□ 0.81e-8■■□□□ 14.1
RPS3P23396 UBE2G1-203ENST00000571980 984 ntTSL 520■□□□□ 0.792e-6■■□□□ 14.1
RPS3P23396 ASRGL1-203ENST00000525496 565 ntTSL 219.68■□□□□ 0.742e-6■■□□□ 14.1
RPS3P23396 KIF1BP-213ENST00000637738 2269 ntTSL 519.68■□□□□ 0.742e-6■■□□□ 14.1
RPS3P23396 UBE2G1-206ENST00000574633 863 ntTSL 219.63■□□□□ 0.732e-6■■□□□ 14.1
RPS3P23396 TFDP2-207ENST00000475734 578 ntTSL 519.47■□□□□ 0.712e-6■■□□□ 14.1
RPS3P23396 TFDP2-216ENST00000491667 566 ntTSL 219.47■□□□□ 0.712e-6■■□□□ 14.1
RPS3P23396 HDGF-209ENST00000495212 744 ntTSL 319.18■□□□□ 0.663e-6■■□□□ 14.1
RPS3P23396 TFDP2-208ENST00000476617 596 ntTSL 419.13■□□□□ 0.652e-6■■□□□ 14.1
RPS3P23396 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.98■□□□□ 0.632e-6■■□□□ 14.1
RPS3P23396 TUSC2-202ENST00000417867 561 ntTSL 518.95■□□□□ 0.622e-6■■□□□ 14.1
RPS3P23396 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.622e-6■■□□□ 14.1
RPS3P23396 TUSC2-206ENST00000463304 475 ntTSL 218.91■□□□□ 0.622e-6■■□□□ 14.1
RPS3P23396 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.72■□□□□ 0.592e-6■■□□□ 14.1
RPS3P23396 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.582e-6■■□□□ 14.1
RPS3P23396 ASRGL1-205ENST00000526096 535 ntTSL 318.67■□□□□ 0.582e-6■■□□□ 14.1
RPS3P23396 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.562e-6■■□□□ 14.1
RPS3P23396 KIF1BP-208ENST00000636200 2707 ntTSL 518.2■□□□□ 0.52e-6■■□□□ 14.1
RPS3P23396 TST-203ENST00000438203 451 ntTSL 318.17■□□□□ 0.52e-6■■□□□ 14.1
RPS3P23396 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.07■□□□□ 0.482e-6■■□□□ 14.1
RPS3P23396 ASRGL1-207ENST00000529226 574 ntTSL 417.98■□□□□ 0.472e-6■■□□□ 14.1
RPS3P23396 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.451e-6■■□□□ 14.1
RPS3P23396 USB1-213ENST00000566292 575 ntTSL 217.62■□□□□ 0.412e-6■■□□□ 14.1
RPS3P23396 TFDP2-221ENST00000495095 575 ntTSL 417.52■□□□□ 0.42e-6■■□□□ 14.1
RPS3P23396 TUSC2-203ENST00000421918 790 ntTSL 517.47■□□□□ 0.392e-6■■□□□ 14.1
RPS3P23396 KIF1BP-206ENST00000635779 2542 ntTSL 517.41■□□□□ 0.382e-6■■□□□ 14.1
RPS3P23396 KIF1BP-209ENST00000637101 2651 ntTSL 517.4■□□□□ 0.382e-6■■□□□ 14.1
RPS3P23396 TFDP2-219ENST00000494358 578 ntTSL 1 (best)17.23■□□□□ 0.352e-6■■□□□ 14.1
RPS3P23396 SLC39A5-207ENST00000437277 588 ntTSL 417.21■□□□□ 0.352e-6■■□□□ 14.1
RPS3P23396 DDX56-207ENST00000448192 691 ntTSL 217.07■□□□□ 0.322e-6■■□□□ 14.1
RPS3P23396 USB1-209ENST00000564387 558 ntTSL 416.94■□□□□ 0.32e-6■■□□□ 14.1
RPS3P23396 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.32e-6■■□□□ 14.1
RPS3P23396 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.292e-6■■□□□ 14.1
RPS3P23396 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.242e-6■■□□□ 14.1
RPS3P23396 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.4■□□□□ 0.222e-6■■□□□ 14.1
RPS3P23396 USB1-211ENST00000565662 719 ntTSL 416.25■□□□□ 0.192e-6■■□□□ 14.1
RPS3P23396 USB1-206ENST00000562534 562 ntTSL 416.09■□□□□ 0.172e-6■■□□□ 14.1
RPS3P23396 USB1-204ENST00000561568 671 ntTSL 416.09■□□□□ 0.172e-6■■□□□ 14.1
RPS3P23396 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.162e-6■■□□□ 14.1
RPS3P23396 USB1-215ENST00000569252 573 ntTSL 415.78■□□□□ 0.122e-6■■□□□ 14.1
RPS3P23396 DHRS1-210ENST00000561273 2027 ntTSL 515.47■□□□□ 0.072e-6■■□□□ 14.1
RPS3P23396 HDGF-204ENST00000465180 2060 ntTSL 1 (best)15.31■□□□□ 0.043e-9■■□□□ 14.1
RPS3P23396 USB1-208ENST00000563207 464 ntTSL 515.29■□□□□ 0.042e-6■■□□□ 14.1
RPS3P23396 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.2■□□□□ 0.022e-6■■□□□ 14.1
RPS3P23396 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.63□□□□□ -0.072e-6■■□□□ 14.1
RPS3P23396 PECR-207ENST00000487318 742 ntTSL 514.57□□□□□ -0.082e-6■■□□□ 14.1
RPS3P23396 SLC39A5-210ENST00000481103 926 ntTSL 214.45□□□□□ -0.12e-6■■□□□ 14.1
RPS3P23396 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.36□□□□□ -0.112e-6■■□□□ 14.1
RPS3P23396 SLC39A5-204ENST00000419753 613 ntTSL 314.32□□□□□ -0.122e-6■■□□□ 14.1
RPS3P23396 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.162e-6■■□□□ 14.1
RPS3P23396 USB1-214ENST00000568848 548 ntTSL 413.97□□□□□ -0.172e-6■■□□□ 14.1
RPS3P23396 PECR-208ENST00000497889 824 ntTSL 513.91□□□□□ -0.182e-6■■□□□ 14.1
RPS3P23396 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.222e-6■■□□□ 14.1
RPS3P23396 SLC39A5-206ENST00000436633 871 ntTSL 513.67□□□□□ -0.222e-6■■□□□ 14.1
RPS3P23396 DHRS1-204ENST00000558340 1623 ntTSL 513.5□□□□□ -0.252e-6■■□□□ 14.1
RPS3P23396 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC13.23□□□□□ -0.293e-9■■□□□ 14.1
RPS3P23396 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.02□□□□□ -0.332e-6■■□□□ 14.1
RPS3P23396 PECR-206ENST00000474093 585 ntTSL 212.99□□□□□ -0.332e-6■■□□□ 14.1
RPS3P23396 SLC39A5-202ENST00000417965 569 ntTSL 412.95□□□□□ -0.342e-6■■□□□ 14.1
RPS3P23396 AZIN1-207ENST00000520402 660 ntTSL 412.92□□□□□ -0.341e-6■■□□□ 14.1
RPS3P23396 DHRS1-207ENST00000559483 629 ntTSL 312.91□□□□□ -0.342e-6■■□□□ 14.1
RPS3P23396 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.89□□□□□ -0.352e-6■■□□□ 14.1
RPS3P23396 HDGF-202ENST00000368206 960 ntTSL 5 BASIC12.71□□□□□ -0.371e-8■■□□□ 14.1
RPS3P23396 PSMD11-205ENST00000493026 2387 ntTSL 212.49□□□□□ -0.412e-6■■□□□ 14.1
RPS3P23396 SLC39A5-205ENST00000424625 559 ntTSL 412.44□□□□□ -0.422e-6■■□□□ 14.1
RPS3P23396 TLN1-204ENST00000465002 543 ntTSL 412.44□□□□□ -0.422e-6■■□□□ 14.1
RPS3P23396 COPB2-212ENST00000514508 635 ntTSL 412.12□□□□□ -0.476e-9■■□□□ 14.1
RPS3P23396 UBE2G1-201ENST00000396981 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.492e-6■■□□□ 14.1
RPS3P23396 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.512e-6■■□□□ 14.1
RPS3P23396 SRSF9-205ENST00000550458 327 ntTSL 311.65□□□□□ -0.542e-6■■□□□ 14.1
RPS3P23396 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.562e-6■■□□□ 14.1
RPS3P23396 DHRS1-203ENST00000558114 609 ntTSL 211.43□□□□□ -0.582e-6■■□□□ 14.1
RPS3P23396 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.62e-6■■□□□ 14.1
RPS3P23396 CDIP1-211ENST00000586768 548 ntTSL 411.32□□□□□ -0.62e-6■■□□□ 14.1
RPS3P23396 COPB2-211ENST00000513274 729 ntTSL 310.91□□□□□ -0.666e-9■■□□□ 14.1
RPS3P23396 GPX2-202ENST00000553522 1134 ntTSL 1 (best)10.9□□□□□ -0.667e-13■■□□□ 14.1
RPS3P23396 DHRS1-208ENST00000560991 565 ntTSL 210.82□□□□□ -0.682e-6■■□□□ 14.1
RPS3P23396 COPB2-209ENST00000512242 848 ntTSL 510.51□□□□□ -0.736e-9■■□□□ 14.1
RPS3P23396 TLN1-205ENST00000466916 446 ntTSL 210.43□□□□□ -0.742e-6■■□□□ 14.1
RPS3P23396 COPB2-208ENST00000512153 629 ntTSL 49.88□□□□□ -0.832e-6■■□□□ 14.1
RPS3P23396 COPB2-207ENST00000510491 669 ntTSL 59.66□□□□□ -0.866e-9■■□□□ 14.1
RPS3P23396 GPX2-205ENST00000612794 1084 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.887e-13■■□□□ 14.1
RPS3P23396 M6PR-203ENST00000537621 581 ntTSL 29.5□□□□□ -0.892e-6■■□□□ 14.1
RPS3P23396 RPRD1B-204ENST00000471511 571 ntTSL 49.37□□□□□ -0.912e-6■■□□□ 14.1
RPS3P23396 AZIN1-203ENST00000517581 576 ntTSL 49.04□□□□□ -0.961e-6■■□□□ 14.1
RPS3P23396 RPRD1B-205ENST00000484683 554 ntTSL 39.01□□□□□ -0.972e-6■■□□□ 14.1
RPS3P23396 TMEM214-212ENST00000478980 572 ntTSL 28.97□□□□□ -0.972e-6■■□□□ 14.1
RPS3P23396 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.981e-6■■□□□ 14.1
Retrieved 100 of 24,271 protein–RNA pairs in 289.1 ms