Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.47■□□□□ 0.23
SDHBP21912 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SDHBP21912 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.47■□□□□ 0.23
SDHBP21912 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.47■□□□□ 0.23
SDHBP21912 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.47■□□□□ 0.23
SDHBP21912 AC093004.1-201ENST00000508850 424 ntBASIC16.47■□□□□ 0.23
SDHBP21912 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.47■□□□□ 0.23
SDHBP21912 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.47■□□□□ 0.23
SDHBP21912 RN7SL219P-201ENST00000582872 296 ntBASIC16.47■□□□□ 0.23
SDHBP21912 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.47■□□□□ 0.23
SDHBP21912 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SDHBP21912 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.47■□□□□ 0.23
SDHBP21912 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SDHBP21912 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.47■□□□□ 0.23
SDHBP21912 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SDHBP21912 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.46■□□□□ 0.23
SDHBP21912 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SDHBP21912 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.46■□□□□ 0.23
SDHBP21912 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.46■□□□□ 0.23
SDHBP21912 HMGA1P7-201ENST00000406908 502 ntBASIC16.46■□□□□ 0.23
SDHBP21912 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.46■□□□□ 0.23
SDHBP21912 ACTBP11-201ENST00000436287 1126 ntBASIC16.46■□□□□ 0.23
SDHBP21912 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SDHBP21912 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.46■□□□□ 0.23
SDHBP21912 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.46■□□□□ 0.23
SDHBP21912 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.46■□□□□ 0.23
SDHBP21912 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.46■□□□□ 0.23
SDHBP21912 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.46■□□□□ 0.23
SDHBP21912 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.46■□□□□ 0.23
SDHBP21912 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.46■□□□□ 0.23
SDHBP21912 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.46■□□□□ 0.23
SDHBP21912 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.46■□□□□ 0.23
SDHBP21912 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.46■□□□□ 0.23
SDHBP21912 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SDHBP21912 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
SDHBP21912 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SDHBP21912 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SDHBP21912 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SDHBP21912 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.46■□□□□ 0.22
SDHBP21912 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
SDHBP21912 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SDHBP21912 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.45■□□□□ 0.22
SDHBP21912 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SDHBP21912 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SDHBP21912 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SDHBP21912 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.45■□□□□ 0.22
SDHBP21912 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.45■□□□□ 0.22
SDHBP21912 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.45■□□□□ 0.22
SDHBP21912 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.45■□□□□ 0.22
SDHBP21912 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.45■□□□□ 0.22
SDHBP21912 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.45■□□□□ 0.22
SDHBP21912 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.45■□□□□ 0.22
SDHBP21912 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.45■□□□□ 0.22
SDHBP21912 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.45■□□□□ 0.22
SDHBP21912 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SDHBP21912 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.45■□□□□ 0.22
SDHBP21912 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SDHBP21912 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.45■□□□□ 0.22
SDHBP21912 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.45■□□□□ 0.22
SDHBP21912 AC093010.1-201ENST00000473625 1624 ntBASIC16.45■□□□□ 0.22
SDHBP21912 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SDHBP21912 AC012569.1-201ENST00000591191 1524 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms