Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.26■□□□□ 0.19
CAPN3P20807 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 AC011270.2-201ENST00000624293 2550 ntBASIC16.26■□□□□ 0.19
CAPN3P20807 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 AP000867.3-201ENST00000524675 377 ntBASIC16.26■□□□□ 0.19
CAPN3P20807 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 AC011467.2-201ENST00000598425 242 ntBASIC16.26■□□□□ 0.19
CAPN3P20807 AC120114.3-201ENST00000611923 658 ntBASIC16.26■□□□□ 0.19
CAPN3P20807 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CAPN3P20807 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.26■□□□□ 0.19
CAPN3P20807 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CAPN3P20807 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.26■□□□□ 0.19
CAPN3P20807 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.26■□□□□ 0.19
CAPN3P20807 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.26■□□□□ 0.19
CAPN3P20807 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CAPN3P20807 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.26■□□□□ 0.19
CAPN3P20807 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.26■□□□□ 0.19
CAPN3P20807 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CAPN3P20807 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.26■□□□□ 0.19
CAPN3P20807 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CAPN3P20807 ME2P1-201ENST00000426028 1970 ntBASIC16.26■□□□□ 0.19
CAPN3P20807 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CAPN3P20807 CROCCP1-201ENST00000426910 5675 ntBASIC16.25■□□□□ 0.19
CAPN3P20807 LINC00554-201ENST00000564841 3011 ntBASIC16.25■□□□□ 0.19
CAPN3P20807 AL365203.3-201ENST00000609742 2057 ntBASIC16.25■□□□□ 0.19
CAPN3P20807 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.25■□□□□ 0.19
CAPN3P20807 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CAPN3P20807 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.25■□□□□ 0.19
CAPN3P20807 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.25■□□□□ 0.19
CAPN3P20807 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.25■□□□□ 0.19
CAPN3P20807 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.25■□□□□ 0.19
CAPN3P20807 AC009533.2-201ENST00000543664 586 ntBASIC16.25■□□□□ 0.19
CAPN3P20807 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.25■□□□□ 0.19
CAPN3P20807 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.25■□□□□ 0.19
CAPN3P20807 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CAPN3P20807 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
CAPN3P20807 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.25■□□□□ 0.19
CAPN3P20807 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.25■□□□□ 0.19
CAPN3P20807 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.25■□□□□ 0.19
CAPN3P20807 MTHFR-217ENST00000641820 1569 ntBASIC16.25■□□□□ 0.19
CAPN3P20807 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN3P20807 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CAPN3P20807 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.25■□□□□ 0.19
CAPN3P20807 AC105917.1-201ENST00000506637 2539 ntBASIC16.24■□□□□ 0.19
CAPN3P20807 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN3P20807 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.24■□□□□ 0.19
CAPN3P20807 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CAPN3P20807 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CAPN3P20807 AC024909.3-201ENST00000611513 2257 ntBASIC16.24■□□□□ 0.19
CAPN3P20807 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CAPN3P20807 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CAPN3P20807 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CAPN3P20807 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CAPN3P20807 AL590627.1-203ENST00000421194 1026 ntBASIC16.24■□□□□ 0.19
CAPN3P20807 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN3P20807 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.24■□□□□ 0.19
CAPN3P20807 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPN3P20807 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPN3P20807 FOSL1P1-201ENST00000511041 816 ntBASIC16.24■□□□□ 0.19
CAPN3P20807 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN3P20807 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPN3P20807 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms