Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.08■□□□□ 0.49
CD58P19256 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CD58P19256 AC078925.2-201ENST00000624013 1973 ntBASIC18.08■□□□□ 0.49
CD58P19256 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD58P19256 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.08■□□□□ 0.48
CD58P19256 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD58P19256 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD58P19256 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.08■□□□□ 0.48
CD58P19256 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 HCG4B-203ENST00000450128 991 ntBASIC18.08■□□□□ 0.48
CD58P19256 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.08■□□□□ 0.48
CD58P19256 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.08■□□□□ 0.48
CD58P19256 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.08■□□□□ 0.48
CD58P19256 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.08■□□□□ 0.48
CD58P19256 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.08■□□□□ 0.48
CD58P19256 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.08■□□□□ 0.48
CD58P19256 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD58P19256 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.08■□□□□ 0.48
CD58P19256 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD58P19256 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD58P19256 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
CD58P19256 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD58P19256 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD58P19256 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD58P19256 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CD58P19256 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD58P19256 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
CD58P19256 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CD58P19256 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 PMS2P1-201ENST00000431037 1228 ntBASIC18.07■□□□□ 0.48
CD58P19256 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 CXCL1P1-201ENST00000502804 216 ntBASIC18.07■□□□□ 0.48
CD58P19256 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.07■□□□□ 0.48
CD58P19256 AC018845.2-201ENST00000568326 409 ntBASIC18.07■□□□□ 0.48
CD58P19256 AC140113.2-201ENST00000604370 208 ntBASIC18.07■□□□□ 0.48
CD58P19256 ACTL9-202ENST00000612068 1252 ntBASIC18.07■□□□□ 0.48
CD58P19256 AC010507.1-201ENST00000633895 436 ntBASIC18.07■□□□□ 0.48
CD58P19256 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.07■□□□□ 0.48
CD58P19256 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.07■□□□□ 0.48
CD58P19256 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD58P19256 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.07■□□□□ 0.48
CD58P19256 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.06■□□□□ 0.48
CD58P19256 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.06■□□□□ 0.48
CD58P19256 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.06■□□□□ 0.48
CD58P19256 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 AL391256.1-201ENST00000443260 1855 ntBASIC18.06■□□□□ 0.48
CD58P19256 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.06■□□□□ 0.48
CD58P19256 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 MED15P5-201ENST00000423150 992 ntBASIC18.06■□□□□ 0.48
CD58P19256 FAM185BP-201ENST00000443595 716 ntBASIC18.06■□□□□ 0.48
CD58P19256 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.06■□□□□ 0.48
CD58P19256 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.06■□□□□ 0.48
CD58P19256 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.06■□□□□ 0.48
CD58P19256 UBALD1-205ENST00000590891 2641 ntBASIC18.06■□□□□ 0.48
CD58P19256 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms