Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CTPS1P17812 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CTPS1P17812 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.92■□□□□ 0.3
CTPS1P17812 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.92■□□□□ 0.3
CTPS1P17812 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.92■□□□□ 0.3
CTPS1P17812 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.92■□□□□ 0.3
CTPS1P17812 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.92■□□□□ 0.3
CTPS1P17812 AC040169.1-201ENST00000565382 521 ntBASIC16.92■□□□□ 0.3
CTPS1P17812 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CTPS1P17812 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.92■□□□□ 0.3
CTPS1P17812 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CTPS1P17812 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.92■□□□□ 0.3
CTPS1P17812 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.91■□□□□ 0.3
CTPS1P17812 AC012569.1-201ENST00000591191 1524 ntBASIC16.91■□□□□ 0.3
CTPS1P17812 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTPS1P17812 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CTPS1P17812 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTPS1P17812 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CTPS1P17812 AL391256.1-201ENST00000443260 1855 ntBASIC16.91■□□□□ 0.3
CTPS1P17812 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.91■□□□□ 0.3
CTPS1P17812 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.91■□□□□ 0.3
CTPS1P17812 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.91■□□□□ 0.3
CTPS1P17812 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CTPS1P17812 AC091167.2-201ENST00000579581 588 ntBASIC16.91■□□□□ 0.3
CTPS1P17812 MIR4515-201ENST00000584082 81 ntBASIC16.91■□□□□ 0.3
CTPS1P17812 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.91■□□□□ 0.3
CTPS1P17812 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.91■□□□□ 0.3
CTPS1P17812 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.91■□□□□ 0.3
CTPS1P17812 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CTPS1P17812 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.91■□□□□ 0.3
CTPS1P17812 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CTPS1P17812 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.91■□□□□ 0.3
CTPS1P17812 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTPS1P17812 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CTPS1P17812 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTPS1P17812 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.91■□□□□ 0.3
CTPS1P17812 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
CTPS1P17812 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.9■□□□□ 0.3
CTPS1P17812 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS1P17812 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CTPS1P17812 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS1P17812 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.9■□□□□ 0.3
CTPS1P17812 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS1P17812 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS1P17812 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.9■□□□□ 0.3
CTPS1P17812 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CTPS1P17812 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS1P17812 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.9■□□□□ 0.3
CTPS1P17812 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.9■□□□□ 0.3
CTPS1P17812 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.9■□□□□ 0.3
CTPS1P17812 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.9■□□□□ 0.3
CTPS1P17812 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTPS1P17812 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms