Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
KRT3P12035 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.77■□□□□ 0.43
KRT3P12035 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT3P12035 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT3P12035 AC006277.1-201ENST00000624348 1610 ntBASIC17.76■□□□□ 0.43
KRT3P12035 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT3P12035 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT3P12035 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
KRT3P12035 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT3P12035 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.76■□□□□ 0.43
KRT3P12035 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT3P12035 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT3P12035 AC013467.2-201ENST00000605472 835 ntBASIC17.76■□□□□ 0.43
KRT3P12035 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT3P12035 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
KRT3P12035 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT3P12035 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
KRT3P12035 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
KRT3P12035 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT3P12035 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 UBALD1-205ENST00000590891 2641 ntBASIC17.75■□□□□ 0.43
KRT3P12035 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 AL118508.1-201ENST00000613502 2345 ntBASIC17.75■□□□□ 0.43
KRT3P12035 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 MRPL3P1-201ENST00000400109 1033 ntBASIC17.75■□□□□ 0.43
KRT3P12035 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 AC092910.1-201ENST00000482027 1129 ntBASIC17.75■□□□□ 0.43
KRT3P12035 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.75■□□□□ 0.43
KRT3P12035 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
KRT3P12035 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.75■□□□□ 0.43
KRT3P12035 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 AL049840.3-201ENST00000602669 611 ntBASIC17.75■□□□□ 0.43
KRT3P12035 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 HLA-A-202ENST00000376806 1854 ntBASIC17.75■□□□□ 0.43
KRT3P12035 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT3P12035 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KRT3P12035 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT3P12035 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.74■□□□□ 0.43
KRT3P12035 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT3P12035 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT3P12035 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT3P12035 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT3P12035 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
KRT3P12035 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT3P12035 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.74■□□□□ 0.43
KRT3P12035 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
KRT3P12035 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.74■□□□□ 0.43
KRT3P12035 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT3P12035 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
KRT3P12035 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT3P12035 MPDU1-223ENST00000582151 728 ntBASIC17.74■□□□□ 0.43
KRT3P12035 AC117500.6-201ENST00000624871 588 ntBASIC17.74■□□□□ 0.43
KRT3P12035 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
KRT3P12035 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms