Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SRPRAP08240 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 AC016027.1-202ENST00000607927 1699 ntBASIC16.95■□□□□ 0.3
SRPRAP08240 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.95■□□□□ 0.3
SRPRAP08240 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SRPRAP08240 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SRPRAP08240 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
SRPRAP08240 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.95■□□□□ 0.3
SRPRAP08240 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.95■□□□□ 0.3
SRPRAP08240 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.95■□□□□ 0.3
SRPRAP08240 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.95■□□□□ 0.3
SRPRAP08240 AL355385.1-201ENST00000606123 409 ntBASIC16.95■□□□□ 0.3
SRPRAP08240 AC093028.1-201ENST00000622998 982 ntBASIC16.95■□□□□ 0.3
SRPRAP08240 AC008267.7-201ENST00000624570 1194 ntBASIC16.95■□□□□ 0.3
SRPRAP08240 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.95■□□□□ 0.3
SRPRAP08240 AC084121.4-201ENST00000641598 221 ntBASIC16.95■□□□□ 0.3
SRPRAP08240 AF228730.8-201ENST00000642140 221 ntBASIC16.95■□□□□ 0.3
SRPRAP08240 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SRPRAP08240 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SRPRAP08240 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
SRPRAP08240 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SRPRAP08240 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SRPRAP08240 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.95■□□□□ 0.3
SRPRAP08240 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRPRAP08240 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.95■□□□□ 0.3
SRPRAP08240 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.95■□□□□ 0.3
SRPRAP08240 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.94■□□□□ 0.3
SRPRAP08240 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.94■□□□□ 0.3
SRPRAP08240 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SRPRAP08240 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.94■□□□□ 0.3
SRPRAP08240 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.94■□□□□ 0.3
SRPRAP08240 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SRPRAP08240 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.94■□□□□ 0.3
SRPRAP08240 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
SRPRAP08240 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.94■□□□□ 0.3
SRPRAP08240 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 CYMP-203ENST00000474680 1263 ntBASIC16.94■□□□□ 0.3
SRPRAP08240 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.94■□□□□ 0.3
SRPRAP08240 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.94■□□□□ 0.3
SRPRAP08240 AC109322.1-201ENST00000524499 1264 ntBASIC16.94■□□□□ 0.3
SRPRAP08240 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.94■□□□□ 0.3
SRPRAP08240 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.94■□□□□ 0.3
SRPRAP08240 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SRPRAP08240 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.94■□□□□ 0.3
SRPRAP08240 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.94■□□□□ 0.3
SRPRAP08240 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SRPRAP08240 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SRPRAP08240 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRPRAP08240 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SRPRAP08240 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.94■□□□□ 0.3
SRPRAP08240 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.93■□□□□ 0.3
SRPRAP08240 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.93■□□□□ 0.3
SRPRAP08240 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.93■□□□□ 0.3
SRPRAP08240 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.93■□□□□ 0.3
SRPRAP08240 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRPRAP08240 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRPRAP08240 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRPRAP08240 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SRPRAP08240 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.93■□□□□ 0.3
SRPRAP08240 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRPRAP08240 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SRPRAP08240 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.93■□□□□ 0.3
SRPRAP08240 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SRPRAP08240 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.93■□□□□ 0.3
SRPRAP08240 KRT18P34-201ENST00000488218 1270 ntBASIC16.93■□□□□ 0.3
SRPRAP08240 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms