Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CSF1RP07333 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CSF1RP07333 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CSF1RP07333 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.53■□□□□ 0.88
CSF1RP07333 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.53■□□□□ 0.88
CSF1RP07333 AC098859.1-201ENST00000502915 1238 ntBASIC20.53■□□□□ 0.88
CSF1RP07333 AC093214.1-201ENST00000511688 1107 ntBASIC20.53■□□□□ 0.88
CSF1RP07333 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.53■□□□□ 0.88
CSF1RP07333 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.53■□□□□ 0.88
CSF1RP07333 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.53■□□□□ 0.88
CSF1RP07333 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CSF1RP07333 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.53■□□□□ 0.88
CSF1RP07333 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
CSF1RP07333 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSF1RP07333 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
CSF1RP07333 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CSF1RP07333 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CSF1RP07333 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.52■□□□□ 0.88
CSF1RP07333 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.52■□□□□ 0.88
CSF1RP07333 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.52■□□□□ 0.88
CSF1RP07333 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.52■□□□□ 0.88
CSF1RP07333 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.52■□□□□ 0.88
CSF1RP07333 AC069120.2-201ENST00000524091 540 ntBASIC20.52■□□□□ 0.88
CSF1RP07333 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.52■□□□□ 0.88
CSF1RP07333 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.52■□□□□ 0.88
CSF1RP07333 AC007967.4-201ENST00000614700 386 ntBASIC20.52■□□□□ 0.88
CSF1RP07333 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSF1RP07333 AL603756.1-201ENST00000606511 2163 ntBASIC20.52■□□□□ 0.88
CSF1RP07333 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CSF1RP07333 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSF1RP07333 AL031731.1-201ENST00000642131 2094 ntBASIC20.52■□□□□ 0.87
CSF1RP07333 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CSF1RP07333 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CSF1RP07333 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CSF1RP07333 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSF1RP07333 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.51■□□□□ 0.87
CSF1RP07333 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSF1RP07333 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.51■□□□□ 0.87
CSF1RP07333 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CSF1RP07333 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSF1RP07333 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSF1RP07333 GGT4P-201ENST00000623672 1708 ntBASIC20.51■□□□□ 0.87
CSF1RP07333 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CSF1RP07333 HLA-H-201ENST00000383620 1096 ntBASIC20.51■□□□□ 0.87
CSF1RP07333 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.51■□□□□ 0.87
CSF1RP07333 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSF1RP07333 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.51■□□□□ 0.87
CSF1RP07333 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSF1RP07333 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.51■□□□□ 0.87
CSF1RP07333 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.51■□□□□ 0.87
CSF1RP07333 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSF1RP07333 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSF1RP07333 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSF1RP07333 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.5■□□□□ 0.87
CSF1RP07333 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
CSF1RP07333 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 BASP1P1-201ENST00000430708 665 ntBASIC20.5■□□□□ 0.87
CSF1RP07333 AC093724.1-201ENST00000448659 1027 ntBASIC20.5■□□□□ 0.87
CSF1RP07333 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.5■□□□□ 0.87
CSF1RP07333 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.5■□□□□ 0.87
CSF1RP07333 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSF1RP07333 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.5■□□□□ 0.87
CSF1RP07333 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms