Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC013467.2-201ENST00000605472 835 ntBASIC19.77■□□□□ 0.76
HLA-DOAP06340 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.77■□□□□ 0.76
HLA-DOAP06340 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOAP06340 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DOAP06340 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
HLA-DOAP06340 AC006277.1-201ENST00000624348 1610 ntBASIC19.76■□□□□ 0.75
HLA-DOAP06340 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 PP12613-201ENST00000424958 2230 ntBASIC19.76■□□□□ 0.75
HLA-DOAP06340 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 AC125807.1-201ENST00000483097 614 ntBASIC19.76■□□□□ 0.75
HLA-DOAP06340 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 AL096865.1-201ENST00000606796 927 ntBASIC19.76■□□□□ 0.75
HLA-DOAP06340 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 AL023806.1-201ENST00000603994 1649 ntBASIC19.76■□□□□ 0.75
HLA-DOAP06340 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOAP06340 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DOAP06340 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DOAP06340 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.75■□□□□ 0.75
HLA-DOAP06340 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DOAP06340 BCRP1-201ENST00000444246 691 ntBASIC19.75■□□□□ 0.75
HLA-DOAP06340 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DOAP06340 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.75■□□□□ 0.75
HLA-DOAP06340 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DOAP06340 AC105233.2-201ENST00000523697 349 ntBASIC19.75■□□□□ 0.75
HLA-DOAP06340 AF228730.5-201ENST00000530288 346 ntBASIC19.75■□□□□ 0.75
HLA-DOAP06340 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DOAP06340 MIR6080-201ENST00000617359 66 ntBASIC19.75■□□□□ 0.75
HLA-DOAP06340 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DOAP06340 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOAP06340 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DOAP06340 AC092068.3-201ENST00000587894 2016 ntBASIC19.75■□□□□ 0.75
HLA-DOAP06340 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOAP06340 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOAP06340 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOAP06340 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOAP06340 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOAP06340 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 AC107890.1-201ENST00000422478 521 ntBASIC19.74■□□□□ 0.75
HLA-DOAP06340 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 AL138918.1-201ENST00000568306 659 ntBASIC19.74■□□□□ 0.75
HLA-DOAP06340 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOAP06340 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOAP06340 AC008677.1-201ENST00000519230 1561 ntBASIC19.74■□□□□ 0.75
HLA-DOAP06340 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOAP06340 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOAP06340 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DOAP06340 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DOAP06340 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DOAP06340 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DOAP06340 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DOAP06340 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms