Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CAPNS1P04632 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.78■□□□□ 0.28
CAPNS1P04632 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.78■□□□□ 0.28
CAPNS1P04632 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.78■□□□□ 0.28
CAPNS1P04632 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.78■□□□□ 0.28
CAPNS1P04632 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.78■□□□□ 0.28
CAPNS1P04632 AC087641.1-201ENST00000557561 1021 ntBASIC16.78■□□□□ 0.28
CAPNS1P04632 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPNS1P04632 AC004877.2-201ENST00000623941 599 ntBASIC16.78■□□□□ 0.28
CAPNS1P04632 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPNS1P04632 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPNS1P04632 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CAPNS1P04632 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPNS1P04632 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CAPNS1P04632 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPNS1P04632 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPNS1P04632 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPNS1P04632 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CAPNS1P04632 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CAPNS1P04632 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CAPNS1P04632 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CAPNS1P04632 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CAPNS1P04632 AC100803.2-201ENST00000562459 1963 ntBASIC16.77■□□□□ 0.28
CAPNS1P04632 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CAPNS1P04632 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CAPNS1P04632 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 MIR661-201ENST00000384842 89 ntBASIC16.77■□□□□ 0.28
CAPNS1P04632 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPNS1P04632 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.77■□□□□ 0.28
CAPNS1P04632 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.77■□□□□ 0.28
CAPNS1P04632 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPNS1P04632 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPNS1P04632 DUX4L17-201ENST00000557360 1267 ntBASIC16.77■□□□□ 0.28
CAPNS1P04632 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPNS1P04632 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.77■□□□□ 0.28
CAPNS1P04632 MIR4751-201ENST00000578027 74 ntBASIC16.77■□□□□ 0.28
CAPNS1P04632 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.77■□□□□ 0.28
CAPNS1P04632 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPNS1P04632 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPNS1P04632 AC004790.2-201ENST00000623588 572 ntBASIC16.77■□□□□ 0.28
CAPNS1P04632 LINC01451-201ENST00000623792 534 ntBASIC16.77■□□□□ 0.28
CAPNS1P04632 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPNS1P04632 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPNS1P04632 AC116353.5-201ENST00000638148 1699 ntBASIC16.77■□□□□ 0.28
CAPNS1P04632 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPNS1P04632 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPNS1P04632 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CAPNS1P04632 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPNS1P04632 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CAPNS1P04632 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
CAPNS1P04632 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CAPNS1P04632 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CAPNS1P04632 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CAPNS1P04632 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CAPNS1P04632 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CAPNS1P04632 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CAPNS1P04632 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPNS1P04632 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPNS1P04632 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPNS1P04632 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPNS1P04632 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPNS1P04632 AC103702.1-201ENST00000548801 2630 ntBASIC16.76■□□□□ 0.27
CAPNS1P04632 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPNS1P04632 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPNS1P04632 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.76■□□□□ 0.27
CAPNS1P04632 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPNS1P04632 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPNS1P04632 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CAPNS1P04632 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPNS1P04632 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPNS1P04632 SPDYE21P-201ENST00000413323 827 ntBASIC16.76■□□□□ 0.27
CAPNS1P04632 ELK2BP-201ENST00000415014 1224 ntBASIC16.76■□□□□ 0.27
CAPNS1P04632 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.76■□□□□ 0.27
CAPNS1P04632 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPNS1P04632 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.76■□□□□ 0.27
CAPNS1P04632 AC007967.3-201ENST00000434308 558 ntBASIC16.76■□□□□ 0.27
CAPNS1P04632 FAM58CP-201ENST00000435741 640 ntBASIC16.76■□□□□ 0.27
CAPNS1P04632 RHOQP3-201ENST00000437982 621 ntBASIC16.76■□□□□ 0.27
CAPNS1P04632 KRT18P65-201ENST00000439811 1286 ntBASIC16.76■□□□□ 0.27
CAPNS1P04632 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms