Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DPB1P04440 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 AC091607.1-201ENST00000490318 1060 ntBASIC15.2■□□□□ 0.02
HLA-DPB1P04440 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 AC092119.3-201ENST00000612618 583 ntBASIC15.2■□□□□ 0.02
HLA-DPB1P04440 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.2■□□□□ 0.02
HLA-DPB1P04440 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DPB1P04440 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 MTHFR-217ENST00000641820 1569 ntBASIC15.19■□□□□ 0.02
HLA-DPB1P04440 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 AC097374.2-201ENST00000618617 1306 ntBASIC15.19■□□□□ 0.02
HLA-DPB1P04440 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.19■□□□□ 0.02
HLA-DPB1P04440 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 LINC00265-3P-201ENST00000447588 903 ntBASIC15.19■□□□□ 0.02
HLA-DPB1P04440 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 TOB2P1-201ENST00000469761 992 ntBASIC15.19■□□□□ 0.02
HLA-DPB1P04440 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 TPSP2-201ENST00000561760 610 ntBASIC15.19■□□□□ 0.02
HLA-DPB1P04440 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.19■□□□□ 0.02
HLA-DPB1P04440 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms