Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOBP04114 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOBP04114 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOBP04114 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOBP04114 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOBP04114 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC10.31□□□□□ -0.76
APOBP04114 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOBP04114 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC10.31□□□□□ -0.76
APOBP04114 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOBP04114 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
APOBP04114 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
APOBP04114 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
APOBP04114 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.3□□□□□ -0.76
APOBP04114 KRT8P49-201ENST00000604166 1432 ntBASIC10.3□□□□□ -0.76
APOBP04114 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC10.3□□□□□ -0.76
APOBP04114 AC092978.1-202ENST00000637590 1327 ntBASIC10.3□□□□□ -0.76
APOBP04114 AC091046.1-201ENST00000331871 207 ntBASIC10.3□□□□□ -0.76
APOBP04114 AC007969.1-201ENST00000433675 447 ntBASIC10.3□□□□□ -0.76
APOBP04114 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.3□□□□□ -0.76
APOBP04114 ACTG1P17-201ENST00000558391 1119 ntBASIC10.3□□□□□ -0.76
APOBP04114 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.3□□□□□ -0.76
APOBP04114 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 AC108860.2-201ENST00000562760 2183 ntBASIC10.3□□□□□ -0.76
APOBP04114 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.3□□□□□ -0.76
APOBP04114 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC10.3□□□□□ -0.76
APOBP04114 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC10.3□□□□□ -0.76
APOBP04114 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC10.3□□□□□ -0.76
APOBP04114 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
APOBP04114 AL022328.1-201ENST00000610050 478 ntBASIC10.3□□□□□ -0.76
APOBP04114 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC10.3□□□□□ -0.76
APOBP04114 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC10.3□□□□□ -0.76
APOBP04114 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC10.3□□□□□ -0.76
APOBP04114 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC10.3□□□□□ -0.76
APOBP04114 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC10.3□□□□□ -0.76
APOBP04114 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC10.3□□□□□ -0.76
APOBP04114 AC105129.2-201ENST00000559536 390 ntBASIC10.3□□□□□ -0.76
APOBP04114 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC10.3□□□□□ -0.76
APOBP04114 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.3□□□□□ -0.76
APOBP04114 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.3□□□□□ -0.76
APOBP04114 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 AC005695.3-201ENST00000614522 232 ntBASIC10.3□□□□□ -0.76
APOBP04114 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.3□□□□□ -0.76
APOBP04114 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
APOBP04114 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC10.3□□□□□ -0.76
APOBP04114 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
APOBP04114 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.3□□□□□ -0.76
APOBP04114 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
APOBP04114 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
APOBP04114 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC10.29□□□□□ -0.76
APOBP04114 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.29□□□□□ -0.76
APOBP04114 AL162726.2-201ENST00000438986 1017 ntBASIC10.29□□□□□ -0.76
APOBP04114 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 RPS15-212ENST00000593052 629 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 AC013467.2-201ENST00000605472 835 ntBASIC10.29□□□□□ -0.76
APOBP04114 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC10.29□□□□□ -0.76
APOBP04114 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC10.29□□□□□ -0.76
APOBP04114 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC10.29□□□□□ -0.76
APOBP04114 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC10.29□□□□□ -0.76
APOBP04114 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
APOBP04114 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC10.29□□□□□ -0.76
APOBP04114 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 LBX2-201ENST00000341396 886 ntTSL 3 BASIC10.29□□□□□ -0.76
APOBP04114 MIR4722-201ENST00000578292 60 ntBASIC10.29□□□□□ -0.76
APOBP04114 MIR3615-201ENST00000581999 87 ntBASIC10.29□□□□□ -0.76
APOBP04114 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
APOBP04114 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms