Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 ARMC10P1-201ENST00000313754 855 ntBASIC15.19■□□□□ 0.02
HLA-DQA2P01906 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 SPDYE21P-201ENST00000413323 827 ntBASIC15.19■□□□□ 0.02
HLA-DQA2P01906 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 MIR3180-1-201ENST00000580374 94 ntBASIC15.19■□□□□ 0.02
HLA-DQA2P01906 MIR3180-3-201ENST00000584616 94 ntBASIC15.19■□□□□ 0.02
HLA-DQA2P01906 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 AC138894.3-201ENST00000603787 634 ntBASIC15.19■□□□□ 0.02
HLA-DQA2P01906 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 AL603756.1-201ENST00000606511 2163 ntBASIC15.19■□□□□ 0.02
HLA-DQA2P01906 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DQA2P01906 TUBB8P12-201ENST00000308911 1335 ntBASIC15.18■□□□□ 0.02
HLA-DQA2P01906 TUBB7P-202ENST00000428444 1305 ntBASIC15.18■□□□□ 0.02
HLA-DQA2P01906 TUBB8P7-204ENST00000567960 1332 ntBASIC15.18■□□□□ 0.02
HLA-DQA2P01906 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 PCDHB17P-201ENST00000539533 2393 ntBASIC15.18■□□□□ 0.02
HLA-DQA2P01906 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 ACTG1P4-201ENST00000425123 1122 ntBASIC15.18■□□□□ 0.02
HLA-DQA2P01906 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 ABCD1P5-201ENST00000445663 754 ntBASIC15.18■□□□□ 0.02
HLA-DQA2P01906 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 AP002490.2-201ENST00000524791 560 ntBASIC15.18■□□□□ 0.02
HLA-DQA2P01906 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 AL591684.3-201ENST00000605187 298 ntBASIC15.18■□□□□ 0.02
HLA-DQA2P01906 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 AP000867.4-201ENST00000641616 219 ntBASIC15.18■□□□□ 0.02
HLA-DQA2P01906 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DQA2P01906 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DQA2P01906 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms