Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.38□□□□□ -0.27
IFNA1P01562 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.38□□□□□ -0.27
IFNA1P01562 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
IFNA1P01562 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.38□□□□□ -0.27
IFNA1P01562 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
IFNA1P01562 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.38□□□□□ -0.27
IFNA1P01562 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.38□□□□□ -0.27
IFNA1P01562 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 AC133681.1-201ENST00000465482 601 ntBASIC13.38□□□□□ -0.27
IFNA1P01562 HLA-J-202ENST00000469281 1241 ntBASIC13.38□□□□□ -0.27
IFNA1P01562 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.38□□□□□ -0.27
IFNA1P01562 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.38□□□□□ -0.27
IFNA1P01562 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.38□□□□□ -0.27
IFNA1P01562 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.38□□□□□ -0.27
IFNA1P01562 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
IFNA1P01562 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
IFNA1P01562 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
IFNA1P01562 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.38□□□□□ -0.27
IFNA1P01562 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.38□□□□□ -0.27
IFNA1P01562 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IFNA1P01562 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.38□□□□□ -0.27
IFNA1P01562 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.37□□□□□ -0.27
IFNA1P01562 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
IFNA1P01562 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
IFNA1P01562 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
IFNA1P01562 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.37□□□□□ -0.27
IFNA1P01562 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
IFNA1P01562 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.37□□□□□ -0.27
IFNA1P01562 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.37□□□□□ -0.27
IFNA1P01562 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.37□□□□□ -0.27
IFNA1P01562 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.37□□□□□ -0.27
IFNA1P01562 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.37□□□□□ -0.27
IFNA1P01562 GUSBP6-202ENST00000438529 1198 ntBASIC13.37□□□□□ -0.27
IFNA1P01562 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.37□□□□□ -0.27
IFNA1P01562 AC124016.1-201ENST00000609552 612 ntBASIC13.37□□□□□ -0.27
IFNA1P01562 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.37□□□□□ -0.27
IFNA1P01562 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
IFNA1P01562 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
IFNA1P01562 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.37□□□□□ -0.27
IFNA1P01562 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
IFNA1P01562 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
IFNA1P01562 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.37□□□□□ -0.27
IFNA1P01562 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.37□□□□□ -0.27
IFNA1P01562 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.37□□□□□ -0.27
IFNA1P01562 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
IFNA1P01562 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IFNA1P01562 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
IFNA1P01562 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IFNA1P01562 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms