Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AC084018.2-201ENST00000613093 2607 ntBASIC17.81■□□□□ 0.44
ZBED1O96006 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZBED1O96006 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.81■□□□□ 0.44
ZBED1O96006 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ZBED1O96006 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ZBED1O96006 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ZBED1O96006 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.8■□□□□ 0.44
ZBED1O96006 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.8■□□□□ 0.44
ZBED1O96006 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.8■□□□□ 0.44
ZBED1O96006 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.8■□□□□ 0.44
ZBED1O96006 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.8■□□□□ 0.44
ZBED1O96006 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ZBED1O96006 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.8■□□□□ 0.44
ZBED1O96006 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.8■□□□□ 0.44
ZBED1O96006 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.8■□□□□ 0.44
ZBED1O96006 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.8■□□□□ 0.44
ZBED1O96006 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.8■□□□□ 0.44
ZBED1O96006 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.8■□□□□ 0.44
ZBED1O96006 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.8■□□□□ 0.44
ZBED1O96006 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.8■□□□□ 0.44
ZBED1O96006 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.8■□□□□ 0.44
ZBED1O96006 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.8■□□□□ 0.44
ZBED1O96006 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ZBED1O96006 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.8■□□□□ 0.44
ZBED1O96006 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 AC106886.4-201ENST00000623557 2502 ntBASIC17.8■□□□□ 0.44
ZBED1O96006 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 KRT8P49-201ENST00000604166 1432 ntBASIC17.8■□□□□ 0.44
ZBED1O96006 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.8■□□□□ 0.44
ZBED1O96006 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZBED1O96006 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ZBED1O96006 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.79■□□□□ 0.44
ZBED1O96006 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.79■□□□□ 0.44
ZBED1O96006 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
ZBED1O96006 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ZBED1O96006 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.79■□□□□ 0.44
ZBED1O96006 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.79■□□□□ 0.44
ZBED1O96006 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.79■□□□□ 0.44
ZBED1O96006 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
ZBED1O96006 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.79■□□□□ 0.44
ZBED1O96006 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.79■□□□□ 0.44
ZBED1O96006 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.79■□□□□ 0.44
ZBED1O96006 AC040169.1-201ENST00000565382 521 ntBASIC17.79■□□□□ 0.44
ZBED1O96006 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.79■□□□□ 0.44
ZBED1O96006 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.79■□□□□ 0.44
ZBED1O96006 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.79■□□□□ 0.44
ZBED1O96006 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.79■□□□□ 0.44
ZBED1O96006 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.79■□□□□ 0.44
ZBED1O96006 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 AC011270.2-201ENST00000624293 2550 ntBASIC17.79■□□□□ 0.44
ZBED1O96006 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZBED1O96006 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.78■□□□□ 0.44
ZBED1O96006 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZBED1O96006 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZBED1O96006 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZBED1O96006 TUBB8P12-201ENST00000308911 1335 ntBASIC17.78■□□□□ 0.44
ZBED1O96006 TUBB7P-202ENST00000428444 1305 ntBASIC17.78■□□□□ 0.44
ZBED1O96006 TUBB8P7-204ENST00000567960 1332 ntBASIC17.78■□□□□ 0.44
ZBED1O96006 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZBED1O96006 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ZBED1O96006 AC005915.1-201ENST00000624912 2018 ntBASIC17.78■□□□□ 0.44
ZBED1O96006 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZBED1O96006 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZBED1O96006 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZBED1O96006 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZBED1O96006 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZBED1O96006 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ZBED1O96006 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms