Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
MBD3O95983 SLC25A3P1-201ENST00000443844 931 ntBASIC19.36■□□□□ 0.69
MBD3O95983 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.36■□□□□ 0.69
MBD3O95983 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.36■□□□□ 0.69
MBD3O95983 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.36■□□□□ 0.69
MBD3O95983 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.36■□□□□ 0.69
MBD3O95983 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
MBD3O95983 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.36■□□□□ 0.69
MBD3O95983 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
MBD3O95983 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.36■□□□□ 0.69
MBD3O95983 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.36■□□□□ 0.69
MBD3O95983 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.36■□□□□ 0.69
MBD3O95983 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
MBD3O95983 AC006277.1-201ENST00000624348 1610 ntBASIC19.36■□□□□ 0.69
MBD3O95983 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3O95983 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
MBD3O95983 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
MBD3O95983 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.35■□□□□ 0.69
MBD3O95983 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 KRT8P49-201ENST00000604166 1432 ntBASIC19.35■□□□□ 0.69
MBD3O95983 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 AC068418.2-201ENST00000577309 3703 ntBASIC19.35■□□□□ 0.69
MBD3O95983 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MBD3O95983 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 AC006449.6-201ENST00000612330 2296 ntBASIC19.35■□□□□ 0.69
MBD3O95983 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 ACTG1P4-201ENST00000425123 1122 ntBASIC19.35■□□□□ 0.69
MBD3O95983 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.35■□□□□ 0.69
MBD3O95983 VENTXP5-201ENST00000523979 775 ntBASIC19.35■□□□□ 0.69
MBD3O95983 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.35■□□□□ 0.69
MBD3O95983 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 AD001527.2-201ENST00000622994 785 ntBASIC19.35■□□□□ 0.69
MBD3O95983 AC011558.1-201ENST00000623459 338 ntBASIC19.35■□□□□ 0.69
MBD3O95983 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MBD3O95983 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3O95983 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MBD3O95983 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.34■□□□□ 0.69
MBD3O95983 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.34■□□□□ 0.69
MBD3O95983 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 AP002414.1-201ENST00000391405 1147 ntBASIC19.34■□□□□ 0.69
MBD3O95983 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
MBD3O95983 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
MBD3O95983 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.34■□□□□ 0.69
MBD3O95983 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.34■□□□□ 0.69
MBD3O95983 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.34■□□□□ 0.69
MBD3O95983 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3O95983 RN7SL606P-201ENST00000472779 293 ntBASIC19.34■□□□□ 0.69
MBD3O95983 MIR4497-201ENST00000583208 89 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms