Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 AC022211.2-201ENST00000585075 2527 ntBASIC20.03■□□□□ 0.8
MBD4O95243 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.03■□□□□ 0.8
MBD4O95243 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.03■□□□□ 0.8
MBD4O95243 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD4O95243 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
MBD4O95243 AC004461.1-201ENST00000412461 403 ntBASIC20.03■□□□□ 0.8
MBD4O95243 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.03■□□□□ 0.8
MBD4O95243 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.03■□□□□ 0.8
MBD4O95243 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.03■□□□□ 0.8
MBD4O95243 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD4O95243 AL135744.1-201ENST00000565098 629 ntBASIC20.03■□□□□ 0.8
MBD4O95243 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
MBD4O95243 AC026120.1-201ENST00000611536 926 ntBASIC20.03■□□□□ 0.8
MBD4O95243 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 AL161645.1-201ENST00000622716 1255 ntBASIC20.03■□□□□ 0.8
MBD4O95243 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
MBD4O95243 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
MBD4O95243 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
MBD4O95243 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MBD4O95243 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD4O95243 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
MBD4O95243 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.02■□□□□ 0.8
MBD4O95243 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.02■□□□□ 0.8
MBD4O95243 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 RNF216P1-203ENST00000404404 2427 ntBASIC20.02■□□□□ 0.8
MBD4O95243 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MBD4O95243 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 TFAMP1-201ENST00000412727 736 ntBASIC20.02■□□□□ 0.8
MBD4O95243 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.02■□□□□ 0.8
MBD4O95243 AP000344.2-201ENST00000512987 629 ntBASIC20.02■□□□□ 0.8
MBD4O95243 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MBD4O95243 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MBD4O95243 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MBD4O95243 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
MBD4O95243 AC027612.4-201ENST00000605371 583 ntBASIC20.02■□□□□ 0.8
MBD4O95243 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 AC016027.1-202ENST00000607927 1699 ntBASIC20.02■□□□□ 0.8
MBD4O95243 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
MBD4O95243 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.02■□□□□ 0.8
MBD4O95243 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MBD4O95243 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
MBD4O95243 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
MBD4O95243 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.02■□□□□ 0.79
MBD4O95243 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MBD4O95243 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.02■□□□□ 0.79
MBD4O95243 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
MBD4O95243 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
MBD4O95243 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
MBD4O95243 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
MBD4O95243 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
MBD4O95243 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
MBD4O95243 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MBD4O95243 AL603756.1-201ENST00000606511 2163 ntBASIC20.01■□□□□ 0.79
MBD4O95243 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
MBD4O95243 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD4O95243 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD4O95243 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MBD4O95243 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD4O95243 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
MBD4O95243 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD4O95243 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MBD4O95243 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MBD4O95243 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.01■□□□□ 0.79
MBD4O95243 SPDYE11-202ENST00000450699 704 ntBASIC20.01■□□□□ 0.79
MBD4O95243 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.01■□□□□ 0.79
MBD4O95243 AP002490.2-201ENST00000524791 560 ntBASIC20.01■□□□□ 0.79
MBD4O95243 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.01■□□□□ 0.79
MBD4O95243 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MBD4O95243 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MBD4O95243 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
MBD4O95243 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MBD4O95243 SPDYE9P-201ENST00000570642 692 ntBASIC20.01■□□□□ 0.79
MBD4O95243 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
MBD4O95243 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.01■□□□□ 0.79
MBD4O95243 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms