Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.89□□□□□ -0.03
KDM4BO94953 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.89□□□□□ -0.03
KDM4BO94953 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KDM4BO94953 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.88□□□□□ -0.03
KDM4BO94953 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.88□□□□□ -0.03
KDM4BO94953 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.88□□□□□ -0.03
KDM4BO94953 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
KDM4BO94953 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.88□□□□□ -0.03
KDM4BO94953 AC007967.3-201ENST00000434308 558 ntBASIC14.88□□□□□ -0.03
KDM4BO94953 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 AL136038.3-201ENST00000561909 1096 ntBASIC14.88□□□□□ -0.03
KDM4BO94953 AC090616.6-201ENST00000582640 721 ntBASIC14.88□□□□□ -0.03
KDM4BO94953 AL592071.1-201ENST00000611956 408 ntBASIC14.88□□□□□ -0.03
KDM4BO94953 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.88□□□□□ -0.03
KDM4BO94953 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.88□□□□□ -0.03
KDM4BO94953 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
KDM4BO94953 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KDM4BO94953 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
KDM4BO94953 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
KDM4BO94953 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.88□□□□□ -0.03
KDM4BO94953 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
KDM4BO94953 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.87□□□□□ -0.03
KDM4BO94953 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.87□□□□□ -0.03
KDM4BO94953 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.87□□□□□ -0.03
KDM4BO94953 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.87□□□□□ -0.03
KDM4BO94953 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.87□□□□□ -0.03
KDM4BO94953 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 AC125634.1-201ENST00000438758 1403 ntBASIC14.87□□□□□ -0.03
KDM4BO94953 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
KDM4BO94953 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
KDM4BO94953 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.87□□□□□ -0.03
KDM4BO94953 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.87□□□□□ -0.03
KDM4BO94953 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
KDM4BO94953 TMPOP1-202ENST00000424642 1267 ntBASIC14.87□□□□□ -0.03
KDM4BO94953 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.87□□□□□ -0.03
KDM4BO94953 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.87□□□□□ -0.03
KDM4BO94953 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.87□□□□□ -0.03
KDM4BO94953 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.87□□□□□ -0.03
KDM4BO94953 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 AC011498.5-201ENST00000592027 486 ntBASIC14.87□□□□□ -0.03
KDM4BO94953 AC019129.2-201ENST00000609837 1235 ntBASIC14.87□□□□□ -0.03
KDM4BO94953 AC124864.1-201ENST00000623408 392 ntBASIC14.87□□□□□ -0.03
KDM4BO94953 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
KDM4BO94953 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
KDM4BO94953 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
KDM4BO94953 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KDM4BO94953 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.86□□□□□ -0.03
KDM4BO94953 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms