Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 AC103702.1-201ENST00000548801 2630 ntBASIC17.11■□□□□ 0.33
USP1O94782 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP1O94782 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP1O94782 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 LINC00895-201ENST00000629028 1637 ntBASIC17.1■□□□□ 0.33
USP1O94782 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
USP1O94782 PRELID1P1-202ENST00000567272 903 ntBASIC17.1■□□□□ 0.33
USP1O94782 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 TERC-201ENST00000602385 541 ntBASIC17.1■□□□□ 0.33
USP1O94782 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.1■□□□□ 0.33
USP1O94782 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 AC243591.1-201ENST00000452967 1364 ntBASIC17.1■□□□□ 0.33
USP1O94782 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
USP1O94782 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
USP1O94782 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.1■□□□□ 0.33
USP1O94782 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
USP1O94782 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.1■□□□□ 0.33
USP1O94782 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.1■□□□□ 0.33
USP1O94782 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP1O94782 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.1■□□□□ 0.33
USP1O94782 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP1O94782 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.09■□□□□ 0.33
USP1O94782 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP1O94782 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP1O94782 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.09■□□□□ 0.33
USP1O94782 NKAPP1-205ENST00000585790 367 ntBASIC17.09■□□□□ 0.33
USP1O94782 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.09■□□□□ 0.33
USP1O94782 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP1O94782 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP1O94782 KRT8P49-201ENST00000604166 1432 ntBASIC17.09■□□□□ 0.33
USP1O94782 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP1O94782 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.09■□□□□ 0.33
USP1O94782 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP1O94782 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP1O94782 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP1O94782 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.09■□□□□ 0.33
USP1O94782 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP1O94782 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP1O94782 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.09■□□□□ 0.33
USP1O94782 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP1O94782 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP1O94782 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP1O94782 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
USP1O94782 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP1O94782 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
USP1O94782 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP1O94782 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP1O94782 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
USP1O94782 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
USP1O94782 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.08■□□□□ 0.33
USP1O94782 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.33
USP1O94782 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.08■□□□□ 0.32
USP1O94782 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
USP1O94782 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.08■□□□□ 0.32
USP1O94782 TPM4P1-201ENST00000436100 807 ntBASIC17.08■□□□□ 0.32
USP1O94782 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.08■□□□□ 0.32
USP1O94782 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.08■□□□□ 0.32
USP1O94782 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.08■□□□□ 0.32
USP1O94782 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.08■□□□□ 0.32
USP1O94782 AC064862.7-201ENST00000604520 867 ntBASIC17.08■□□□□ 0.32
USP1O94782 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.08■□□□□ 0.32
USP1O94782 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.08■□□□□ 0.32
USP1O94782 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
USP1O94782 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP1O94782 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.08■□□□□ 0.32
USP1O94782 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.08■□□□□ 0.32
USP1O94782 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms