Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
UPK1BO75841 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.7□□□□□ -0.06
UPK1BO75841 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1BO75841 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1BO75841 GPR89P-201ENST00000407924 1495 ntBASIC14.69□□□□□ -0.06
UPK1BO75841 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
UPK1BO75841 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.69□□□□□ -0.06
UPK1BO75841 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1BO75841 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1BO75841 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
UPK1BO75841 AC011506.1-201ENST00000474329 610 ntBASIC14.69□□□□□ -0.06
UPK1BO75841 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.69□□□□□ -0.06
UPK1BO75841 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.69□□□□□ -0.06
UPK1BO75841 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1BO75841 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.69□□□□□ -0.06
UPK1BO75841 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
UPK1BO75841 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
UPK1BO75841 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
UPK1BO75841 AP000692.2-201ENST00000608391 879 ntBASIC14.69□□□□□ -0.06
UPK1BO75841 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.69□□□□□ -0.06
UPK1BO75841 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
UPK1BO75841 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
UPK1BO75841 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.69□□□□□ -0.06
UPK1BO75841 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
UPK1BO75841 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
UPK1BO75841 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1BO75841 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
UPK1BO75841 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1BO75841 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.68□□□□□ -0.06
UPK1BO75841 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.68□□□□□ -0.06
UPK1BO75841 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
UPK1BO75841 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.68□□□□□ -0.06
UPK1BO75841 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
UPK1BO75841 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.68□□□□□ -0.06
UPK1BO75841 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 CA15P1-201ENST00000481698 905 ntBASIC14.68□□□□□ -0.06
UPK1BO75841 WWOX-216ENST00000569818 525 ntBASIC14.68□□□□□ -0.06
UPK1BO75841 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.68□□□□□ -0.06
UPK1BO75841 AL353708.3-201ENST00000610272 989 ntBASIC14.68□□□□□ -0.06
UPK1BO75841 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.68□□□□□ -0.06
UPK1BO75841 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
UPK1BO75841 AC096733.2-201ENST00000609937 1394 ntBASIC14.68□□□□□ -0.06
UPK1BO75841 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms