Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.04■□□□□ 0.32
PRAMEF11O60813 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEF11O60813 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEF11O60813 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.04■□□□□ 0.32
PRAMEF11O60813 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 PMS2P4-201ENST00000412466 1052 ntBASIC17.04■□□□□ 0.32
PRAMEF11O60813 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 AC109635.5-201ENST00000533593 962 ntBASIC17.04■□□□□ 0.32
PRAMEF11O60813 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.04■□□□□ 0.32
PRAMEF11O60813 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.04■□□□□ 0.32
PRAMEF11O60813 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 AL009183.1-201ENST00000603760 355 ntBASIC17.04■□□□□ 0.32
PRAMEF11O60813 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.04■□□□□ 0.32
PRAMEF11O60813 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEF11O60813 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEF11O60813 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEF11O60813 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEF11O60813 AC011676.5-201ENST00000624864 2660 ntBASIC17.04■□□□□ 0.32
PRAMEF11O60813 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 AC009053.2-201ENST00000563701 2365 ntBASIC17.03■□□□□ 0.32
PRAMEF11O60813 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 YBX2P1-201ENST00000394192 760 ntBASIC17.03■□□□□ 0.32
PRAMEF11O60813 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 MTDHP5-201ENST00000598980 586 ntBASIC17.03■□□□□ 0.32
PRAMEF11O60813 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.03■□□□□ 0.32
PRAMEF11O60813 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF11O60813 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF11O60813 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF11O60813 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF11O60813 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF11O60813 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF11O60813 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF11O60813 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEF11O60813 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF11O60813 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PRAMEF11O60813 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEF11O60813 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.02■□□□□ 0.31
PRAMEF11O60813 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEF11O60813 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.02■□□□□ 0.31
PRAMEF11O60813 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.02■□□□□ 0.31
PRAMEF11O60813 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF11O60813 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF11O60813 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF11O60813 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF11O60813 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF11O60813 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms