Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.8■□□□□ 0.28
KLHL41O60662 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KLHL41O60662 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
KLHL41O60662 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.8■□□□□ 0.28
KLHL41O60662 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.8■□□□□ 0.28
KLHL41O60662 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
KLHL41O60662 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHL41O60662 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KLHL41O60662 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.79■□□□□ 0.28
KLHL41O60662 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.79■□□□□ 0.28
KLHL41O60662 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.79■□□□□ 0.28
KLHL41O60662 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KLHL41O60662 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KLHL41O60662 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.79■□□□□ 0.28
KLHL41O60662 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.79■□□□□ 0.28
KLHL41O60662 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.79■□□□□ 0.28
KLHL41O60662 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 COX5BP2-201ENST00000392354 334 ntBASIC16.79■□□□□ 0.28
KLHL41O60662 AF186996.4-201ENST00000467186 377 ntBASIC16.79■□□□□ 0.28
KLHL41O60662 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.79■□□□□ 0.28
KLHL41O60662 AC009533.2-201ENST00000543664 586 ntBASIC16.79■□□□□ 0.28
KLHL41O60662 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.79■□□□□ 0.28
KLHL41O60662 BX640515.1-201ENST00000617215 977 ntBASIC16.79■□□□□ 0.28
KLHL41O60662 AC114341.1-201ENST00000618070 349 ntBASIC16.79■□□□□ 0.28
KLHL41O60662 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.79■□□□□ 0.28
KLHL41O60662 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KLHL41O60662 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.79■□□□□ 0.28
KLHL41O60662 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHL41O60662 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KLHL41O60662 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.79■□□□□ 0.28
KLHL41O60662 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.78■□□□□ 0.28
KLHL41O60662 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.78■□□□□ 0.28
KLHL41O60662 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.78■□□□□ 0.28
KLHL41O60662 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.78■□□□□ 0.28
KLHL41O60662 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.78■□□□□ 0.28
KLHL41O60662 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.78■□□□□ 0.28
KLHL41O60662 MYCLP1-201ENST00000372451 1075 ntBASIC16.78■□□□□ 0.28
KLHL41O60662 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.78■□□□□ 0.28
KLHL41O60662 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 AC079776.4-201ENST00000511039 504 ntBASIC16.78■□□□□ 0.28
KLHL41O60662 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.78■□□□□ 0.28
KLHL41O60662 AP001005.1-201ENST00000571755 1248 ntBASIC16.78■□□□□ 0.28
KLHL41O60662 MIR5100-201ENST00000579544 119 ntBASIC16.78■□□□□ 0.28
KLHL41O60662 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.78■□□□□ 0.28
KLHL41O60662 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
KLHL41O60662 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KLHL41O60662 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.78■□□□□ 0.28
KLHL41O60662 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.78■□□□□ 0.28
KLHL41O60662 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.78■□□□□ 0.28
KLHL41O60662 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 AC068418.2-201ENST00000577309 3703 ntBASIC16.78■□□□□ 0.28
KLHL41O60662 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHL41O60662 AC007950.2-201ENST00000615045 2347 ntBASIC16.78■□□□□ 0.28
KLHL41O60662 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.78■□□□□ 0.28
KLHL41O60662 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
KLHL41O60662 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.77■□□□□ 0.28
KLHL41O60662 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KLHL41O60662 EGFEM1P-202ENST00000431685 1563 ntBASIC16.77■□□□□ 0.28
KLHL41O60662 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KLHL41O60662 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHL41O60662 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHL41O60662 LINC00554-201ENST00000564841 3011 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms