Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CREB3O43889 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
CREB3O43889 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CREB3O43889 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CREB3O43889 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.63■□□□□ 0.41
CREB3O43889 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CREB3O43889 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CREB3O43889 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.62■□□□□ 0.41
CREB3O43889 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.62■□□□□ 0.41
CREB3O43889 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CREB3O43889 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.62■□□□□ 0.41
CREB3O43889 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.62■□□□□ 0.41
CREB3O43889 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.62■□□□□ 0.41
CREB3O43889 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CREB3O43889 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
CREB3O43889 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CREB3O43889 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.62■□□□□ 0.41
CREB3O43889 PAWRP1-201ENST00000451083 565 ntBASIC17.62■□□□□ 0.41
CREB3O43889 AC079776.4-201ENST00000511039 504 ntBASIC17.62■□□□□ 0.41
CREB3O43889 RNA5SP419-201ENST00000515908 135 ntBASIC17.62■□□□□ 0.41
CREB3O43889 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.62■□□□□ 0.41
CREB3O43889 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.62■□□□□ 0.41
CREB3O43889 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.62■□□□□ 0.41
CREB3O43889 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
CREB3O43889 AC116407.3-201ENST00000623905 1129 ntBASIC17.62■□□□□ 0.41
CREB3O43889 AC117500.6-201ENST00000624871 588 ntBASIC17.62■□□□□ 0.41
CREB3O43889 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CREB3O43889 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.62■□□□□ 0.41
CREB3O43889 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.62■□□□□ 0.41
CREB3O43889 NKILA-202ENST00000614771 2598 ntBASIC17.62■□□□□ 0.41
CREB3O43889 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CREB3O43889 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.62■□□□□ 0.41
CREB3O43889 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CREB3O43889 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 PCDHB17P-201ENST00000539533 2393 ntBASIC17.61■□□□□ 0.41
CREB3O43889 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
CREB3O43889 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 AC011676.5-201ENST00000624864 2660 ntBASIC17.61■□□□□ 0.41
CREB3O43889 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 NFIC-211ENST00000641145 8399 ntBASIC17.61■□□□□ 0.41
CREB3O43889 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.61■□□□□ 0.41
CREB3O43889 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.61■□□□□ 0.41
CREB3O43889 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.61■□□□□ 0.41
CREB3O43889 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.61■□□□□ 0.41
CREB3O43889 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.61■□□□□ 0.41
CREB3O43889 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.61■□□□□ 0.41
CREB3O43889 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.61■□□□□ 0.41
CREB3O43889 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CREB3O43889 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.61■□□□□ 0.41
CREB3O43889 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CREB3O43889 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CREB3O43889 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.61■□□□□ 0.41
CREB3O43889 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.61■□□□□ 0.41
CREB3O43889 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.61■□□□□ 0.41
CREB3O43889 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CREB3O43889 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CREB3O43889 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CREB3O43889 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CREB3O43889 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CREB3O43889 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CREB3O43889 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CREB3O43889 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CREB3O43889 AL118508.1-201ENST00000613502 2345 ntBASIC17.6■□□□□ 0.41
CREB3O43889 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.6■□□□□ 0.41
CREB3O43889 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CREB3O43889 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CREB3O43889 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CREB3O43889 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CREB3O43889 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CREB3O43889 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.6■□□□□ 0.41
CREB3O43889 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CREB3O43889 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.6■□□□□ 0.41
CREB3O43889 AC098831.1-202ENST00000438821 336 ntBASIC17.6■□□□□ 0.41
CREB3O43889 AC087163.2-201ENST00000457299 853 ntBASIC17.6■□□□□ 0.41
CREB3O43889 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CREB3O43889 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CREB3O43889 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.6■□□□□ 0.41
CREB3O43889 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms