Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC28A2O43868 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC28A2O43868 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
SLC28A2O43868 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SLC28A2O43868 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 AC125634.1-201ENST00000438758 1403 ntBASIC16.28■□□□□ 0.2
SLC28A2O43868 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SLC28A2O43868 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SLC28A2O43868 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC28A2O43868 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.27■□□□□ 0.2
SLC28A2O43868 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC28A2O43868 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SLC28A2O43868 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SLC28A2O43868 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC28A2O43868 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC28A2O43868 AC007274.1-201ENST00000439805 662 ntBASIC16.27■□□□□ 0.2
SLC28A2O43868 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC28A2O43868 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.27■□□□□ 0.2
SLC28A2O43868 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC28A2O43868 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC28A2O43868 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC28A2O43868 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC28A2O43868 AC018845.2-201ENST00000568326 409 ntBASIC16.27■□□□□ 0.2
SLC28A2O43868 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC28A2O43868 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC28A2O43868 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SLC28A2O43868 AC019129.2-201ENST00000609837 1235 ntBASIC16.27■□□□□ 0.2
SLC28A2O43868 AC012645.4-201ENST00000610691 1061 ntBASIC16.27■□□□□ 0.2
SLC28A2O43868 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC28A2O43868 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 AC060834.1-201ENST00000443027 2032 ntBASIC16.27■□□□□ 0.2
SLC28A2O43868 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC28A2O43868 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SLC28A2O43868 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SLC28A2O43868 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A2O43868 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
SLC28A2O43868 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A2O43868 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A2O43868 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC28A2O43868 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SLC28A2O43868 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A2O43868 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC28A2O43868 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC28A2O43868 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC28A2O43868 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC28A2O43868 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC28A2O43868 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC28A2O43868 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC28A2O43868 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 AC124067.4-201ENST00000519691 2379 ntBASIC16.26■□□□□ 0.19
SLC28A2O43868 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC28A2O43868 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.26■□□□□ 0.19
SLC28A2O43868 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC28A2O43868 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC28A2O43868 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC28A2O43868 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC28A2O43868 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.26■□□□□ 0.19
SLC28A2O43868 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC28A2O43868 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC28A2O43868 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.26■□□□□ 0.19
SLC28A2O43868 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC28A2O43868 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC28A2O43868 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SLC28A2O43868 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC28A2O43868 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC28A2O43868 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms