Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXA2O43364 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXA2O43364 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXA2O43364 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXA2O43364 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXA2O43364 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HOXA2O43364 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HOXA2O43364 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXA2O43364 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXA2O43364 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXA2O43364 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXA2O43364 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.9■□□□□ 0.46
HOXA2O43364 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXA2O43364 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.9■□□□□ 0.46
HOXA2O43364 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.9■□□□□ 0.46
HOXA2O43364 SPTSSB-204ENST00000617024 1292 ntBASIC17.9■□□□□ 0.46
HOXA2O43364 SPDYE12P-201ENST00000618416 771 ntBASIC17.9■□□□□ 0.46
HOXA2O43364 AL035252.4-201ENST00000624174 288 ntBASIC17.9■□□□□ 0.46
HOXA2O43364 AL358472.5-202ENST00000641448 1267 ntBASIC17.9■□□□□ 0.46
HOXA2O43364 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXA2O43364 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXA2O43364 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXA2O43364 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HOXA2O43364 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.9■□□□□ 0.46
HOXA2O43364 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HOXA2O43364 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HOXA2O43364 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HOXA2O43364 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXA2O43364 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.89■□□□□ 0.45
HOXA2O43364 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXA2O43364 AC098859.1-201ENST00000502915 1238 ntBASIC17.89■□□□□ 0.45
HOXA2O43364 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXA2O43364 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.89■□□□□ 0.45
HOXA2O43364 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXA2O43364 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXA2O43364 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.89■□□□□ 0.45
HOXA2O43364 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HOXA2O43364 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HOXA2O43364 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXA2O43364 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HOXA2O43364 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
HOXA2O43364 AC022144.1-201ENST00000602255 1580 ntBASIC17.88■□□□□ 0.45
HOXA2O43364 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXA2O43364 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HOXA2O43364 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HOXA2O43364 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.88■□□□□ 0.45
HOXA2O43364 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.88■□□□□ 0.45
HOXA2O43364 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.88■□□□□ 0.45
HOXA2O43364 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.88■□□□□ 0.45
HOXA2O43364 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.88■□□□□ 0.45
HOXA2O43364 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.88■□□□□ 0.45
HOXA2O43364 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.88■□□□□ 0.45
HOXA2O43364 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.88■□□□□ 0.45
HOXA2O43364 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXA2O43364 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXA2O43364 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.88■□□□□ 0.45
HOXA2O43364 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.88■□□□□ 0.45
HOXA2O43364 AL138828.2-201ENST00000615812 383 ntBASIC17.88■□□□□ 0.45
HOXA2O43364 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXA2O43364 AC073439.1-201ENST00000624121 1774 ntBASIC17.88■□□□□ 0.45
HOXA2O43364 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HOXA2O43364 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXA2O43364 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
HOXA2O43364 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HOXA2O43364 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.88■□□□□ 0.45
HOXA2O43364 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXA2O43364 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA2O43364 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HOXA2O43364 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXA2O43364 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HOXA2O43364 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms