Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.46■□□□□ 0.39
MSI1O43347 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.46■□□□□ 0.38
MSI1O43347 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
MSI1O43347 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
MSI1O43347 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
MSI1O43347 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MSI1O43347 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MSI1O43347 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MSI1O43347 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MSI1O43347 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.45■□□□□ 0.38
MSI1O43347 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 RNU1-129P-201ENST00000384064 167 ntBASIC17.45■□□□□ 0.38
MSI1O43347 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.45■□□□□ 0.38
MSI1O43347 YBX1P5-201ENST00000509441 847 ntBASIC17.45■□□□□ 0.38
MSI1O43347 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.45■□□□□ 0.38
MSI1O43347 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.45■□□□□ 0.38
MSI1O43347 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.45■□□□□ 0.38
MSI1O43347 U1.21-201ENST00000580816 167 ntBASIC17.45■□□□□ 0.38
MSI1O43347 AC099522.2-201ENST00000607001 744 ntBASIC17.45■□□□□ 0.38
MSI1O43347 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 AC134684.3-201ENST00000641758 218 ntBASIC17.45■□□□□ 0.38
MSI1O43347 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.45■□□□□ 0.38
MSI1O43347 AC006277.1-201ENST00000624348 1610 ntBASIC17.45■□□□□ 0.38
MSI1O43347 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 TNRC18P3-201ENST00000441896 2691 ntBASIC17.45■□□□□ 0.38
MSI1O43347 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 AL391256.1-201ENST00000443260 1855 ntBASIC17.45■□□□□ 0.38
MSI1O43347 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.45■□□□□ 0.38
MSI1O43347 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.45■□□□□ 0.38
MSI1O43347 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.45■□□□□ 0.38
MSI1O43347 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.45■□□□□ 0.38
MSI1O43347 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MSI1O43347 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MSI1O43347 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
MSI1O43347 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.44■□□□□ 0.38
MSI1O43347 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.44■□□□□ 0.38
MSI1O43347 RPS8P6-201ENST00000426177 609 ntBASIC17.44■□□□□ 0.38
MSI1O43347 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.44■□□□□ 0.38
MSI1O43347 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 CEND1P1-201ENST00000451006 455 ntBASIC17.44■□□□□ 0.38
MSI1O43347 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.44■□□□□ 0.38
MSI1O43347 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.44■□□□□ 0.38
MSI1O43347 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.44■□□□□ 0.38
MSI1O43347 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.44■□□□□ 0.38
MSI1O43347 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MSI1O43347 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.44■□□□□ 0.38
MSI1O43347 AL031055.1-201ENST00000606362 631 ntBASIC17.44■□□□□ 0.38
MSI1O43347 AP001350.2-201ENST00000625104 1094 ntBASIC17.44■□□□□ 0.38
MSI1O43347 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.44■□□□□ 0.38
MSI1O43347 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 ELL2P1-201ENST00000413990 1906 ntBASIC17.44■□□□□ 0.38
MSI1O43347 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MSI1O43347 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MSI1O43347 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.44■□□□□ 0.38
MSI1O43347 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MSI1O43347 LINC00895-201ENST00000629028 1637 ntBASIC17.43■□□□□ 0.38
MSI1O43347 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
MSI1O43347 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MSI1O43347 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MSI1O43347 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms