Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MTSS1O43312 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
MTSS1O43312 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.22■□□□□ 0.35
MTSS1O43312 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
MTSS1O43312 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.22■□□□□ 0.35
MTSS1O43312 AC079781.3-201ENST00000449110 356 ntBASIC17.22■□□□□ 0.35
MTSS1O43312 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.22■□□□□ 0.35
MTSS1O43312 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.22■□□□□ 0.35
MTSS1O43312 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.22■□□□□ 0.35
MTSS1O43312 AL160237.2-201ENST00000556165 472 ntBASIC17.22■□□□□ 0.35
MTSS1O43312 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.22■□□□□ 0.35
MTSS1O43312 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.22■□□□□ 0.35
MTSS1O43312 AC104692.2-201ENST00000603054 253 ntBASIC17.22■□□□□ 0.35
MTSS1O43312 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.22■□□□□ 0.35
MTSS1O43312 AP001350.2-201ENST00000625104 1094 ntBASIC17.22■□□□□ 0.35
MTSS1O43312 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.22■□□□□ 0.35
MTSS1O43312 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MTSS1O43312 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MTSS1O43312 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.22■□□□□ 0.35
MTSS1O43312 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
MTSS1O43312 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MTSS1O43312 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.22■□□□□ 0.35
MTSS1O43312 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 AC131009.4-201ENST00000624048 1740 ntBASIC17.21■□□□□ 0.35
MTSS1O43312 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MTSS1O43312 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MTSS1O43312 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
MTSS1O43312 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.21■□□□□ 0.35
MTSS1O43312 MRPL20P1-201ENST00000400819 433 ntBASIC17.21■□□□□ 0.35
MTSS1O43312 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.21■□□□□ 0.35
MTSS1O43312 HCG4-201ENST00000418983 998 ntBASIC17.21■□□□□ 0.35
MTSS1O43312 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.21■□□□□ 0.35
MTSS1O43312 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 AC107918.2-201ENST00000530817 355 ntBASIC17.21■□□□□ 0.35
MTSS1O43312 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.21■□□□□ 0.35
MTSS1O43312 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 FAM215A-202ENST00000632077 792 ntBASIC17.21■□□□□ 0.35
MTSS1O43312 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.21■□□□□ 0.35
MTSS1O43312 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.21■□□□□ 0.35
MTSS1O43312 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MTSS1O43312 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MTSS1O43312 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 AC099398.1-201ENST00000567919 2776 ntBASIC17.21■□□□□ 0.35
MTSS1O43312 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MTSS1O43312 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.21■□□□□ 0.35
MTSS1O43312 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MTSS1O43312 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MTSS1O43312 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MTSS1O43312 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.2■□□□□ 0.34
MTSS1O43312 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 AC124067.4-201ENST00000519691 2379 ntBASIC17.2■□□□□ 0.34
MTSS1O43312 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.2■□□□□ 0.34
MTSS1O43312 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.2■□□□□ 0.34
MTSS1O43312 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.2■□□□□ 0.34
MTSS1O43312 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.2■□□□□ 0.34
MTSS1O43312 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.2■□□□□ 0.34
MTSS1O43312 AP002469.2-201ENST00000531724 424 ntBASIC17.2■□□□□ 0.34
MTSS1O43312 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.2■□□□□ 0.34
MTSS1O43312 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MTSS1O43312 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.2■□□□□ 0.34
MTSS1O43312 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.2■□□□□ 0.34
MTSS1O43312 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MTSS1O43312 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
MTSS1O43312 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
MTSS1O43312 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
MTSS1O43312 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MTSS1O43312 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MTSS1O43312 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms