Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRIM38O00635 PCDH8P1-201ENST00000428983 2773 ntBASIC17■□□□□ 0.31
TRIM38O00635 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRIM38O00635 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM38O00635 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM38O00635 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM38O00635 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM38O00635 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM38O00635 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM38O00635 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRIM38O00635 AC097637.2-201ENST00000624096 1997 ntBASIC16.99■□□□□ 0.31
TRIM38O00635 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM38O00635 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM38O00635 PTCHD3P3-201ENST00000403073 906 ntBASIC16.99■□□□□ 0.31
TRIM38O00635 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM38O00635 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.99■□□□□ 0.31
TRIM38O00635 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM38O00635 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM38O00635 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM38O00635 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM38O00635 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TRIM38O00635 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM38O00635 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM38O00635 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TRIM38O00635 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 DOC2GP-204ENST00000639052 2548 ntBASIC16.99■□□□□ 0.31
TRIM38O00635 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM38O00635 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM38O00635 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM38O00635 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TRIM38O00635 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRIM38O00635 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRIM38O00635 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM38O00635 BX276092.7-203ENST00000637198 1536 ntBASIC16.98■□□□□ 0.31
TRIM38O00635 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 AC254562.1-201ENST00000417586 456 ntBASIC16.98■□□□□ 0.31
TRIM38O00635 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM38O00635 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TRIM38O00635 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM38O00635 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM38O00635 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 LINC02084-201ENST00000606069 1096 ntBASIC16.98■□□□□ 0.31
TRIM38O00635 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 AC010654.1-201ENST00000615722 808 ntBASIC16.98■□□□□ 0.31
TRIM38O00635 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM38O00635 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM38O00635 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRIM38O00635 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM38O00635 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM38O00635 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
TRIM38O00635 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM38O00635 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM38O00635 MRPL20P1-201ENST00000400819 433 ntBASIC16.97■□□□□ 0.31
TRIM38O00635 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM38O00635 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM38O00635 IGHV3-52-201ENST00000519770 353 ntBASIC16.97■□□□□ 0.31
TRIM38O00635 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms