Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN5O00501 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN5O00501 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLDN5O00501 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLDN5O00501 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLDN5O00501 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN5O00501 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN5O00501 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 ADH5P3-201ENST00000433842 1137 ntBASIC17.72■□□□□ 0.43
CLDN5O00501 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN5O00501 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.72■□□□□ 0.43
CLDN5O00501 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN5O00501 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN5O00501 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLDN5O00501 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLDN5O00501 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN5O00501 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN5O00501 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN5O00501 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN5O00501 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN5O00501 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN5O00501 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLDN5O00501 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN5O00501 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN5O00501 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLDN5O00501 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CLDN5O00501 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CLDN5O00501 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLDN5O00501 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CLDN5O00501 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CLDN5O00501 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN5O00501 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 AL355306.1-201ENST00000415580 579 ntBASIC17.71■□□□□ 0.43
CLDN5O00501 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
CLDN5O00501 AC092474.2-201ENST00000424288 719 ntBASIC17.71■□□□□ 0.43
CLDN5O00501 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN5O00501 AL671277.1-201ENST00000429656 993 ntBASIC17.71■□□□□ 0.43
CLDN5O00501 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN5O00501 AP001160.2-201ENST00000596071 487 ntBASIC17.71■□□□□ 0.43
CLDN5O00501 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN5O00501 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CLDN5O00501 AC013467.2-201ENST00000605472 835 ntBASIC17.71■□□□□ 0.43
CLDN5O00501 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN5O00501 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN5O00501 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLDN5O00501 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN5O00501 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN5O00501 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLDN5O00501 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CLDN5O00501 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN5O00501 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN5O00501 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLDN5O00501 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.71■□□□□ 0.42
CLDN5O00501 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CLDN5O00501 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN5O00501 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN5O00501 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLDN5O00501 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN5O00501 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN5O00501 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN5O00501 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN5O00501 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN5O00501 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN5O00501 AL603756.1-201ENST00000606511 2163 ntBASIC17.7■□□□□ 0.42
CLDN5O00501 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN5O00501 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN5O00501 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN5O00501 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CLDN5O00501 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN5O00501 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN5O00501 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN5O00501 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN5O00501 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLDN5O00501 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN5O00501 AP006288.1-201ENST00000446065 395 ntBASIC17.7■□□□□ 0.42
CLDN5O00501 ACTG1P14-201ENST00000446382 1122 ntBASIC17.7■□□□□ 0.42
CLDN5O00501 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.7■□□□□ 0.42
CLDN5O00501 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN5O00501 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms