Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC010507.1-201ENST00000633895 436 ntBASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TMX2-CTNND1H3BSU7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 CYMP-203ENST00000474680 1263 ntBASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMX2-CTNND1H3BSU7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 PI4KAP1-204ENST00000612579 1703 ntBASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 AC009949.1-201ENST00000623048 1830 ntBASIC16.59■□□□□ 0.25
TMX2-CTNND1H3BSU7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TMX2-CTNND1H3BSU7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TMX2-CTNND1H3BSU7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms