Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LINC01546A6NGU7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.88□□□□□ -0.51
LINC01546A6NGU7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 AC026748.1-201ENST00000624349 3251 ntBASIC11.88□□□□□ -0.51
LINC01546A6NGU7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 ACTG1P4-201ENST00000425123 1122 ntBASIC11.88□□□□□ -0.51
LINC01546A6NGU7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 RBM17P1-201ENST00000453646 1190 ntBASIC11.88□□□□□ -0.51
LINC01546A6NGU7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 GPR32P1-201ENST00000601788 811 ntBASIC11.88□□□□□ -0.51
LINC01546A6NGU7 AC026471.5-201ENST00000615068 467 ntBASIC11.88□□□□□ -0.51
LINC01546A6NGU7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01546A6NGU7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 AC125634.1-201ENST00000438758 1403 ntBASIC11.87□□□□□ -0.51
LINC01546A6NGU7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 FAM220CP-201ENST00000395253 831 ntBASIC11.87□□□□□ -0.51
LINC01546A6NGU7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 PENK-204ENST00000518770 863 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms