Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 RARRES2P9-201ENST00000565168 469 ntBASIC14.71□□□□□ -0.05
MBD3L3A6NE82 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 AJ011932.1-201ENST00000621707 465 ntBASIC14.71□□□□□ -0.05
MBD3L3A6NE82 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
MBD3L3A6NE82 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
MBD3L3A6NE82 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.71□□□□□ -0.06
MBD3L3A6NE82 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.7□□□□□ -0.06
MBD3L3A6NE82 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 AC069120.2-201ENST00000524091 540 ntBASIC14.7□□□□□ -0.06
MBD3L3A6NE82 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD3L3A6NE82 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 AL391256.1-201ENST00000443260 1855 ntBASIC14.69□□□□□ -0.06
MBD3L3A6NE82 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 AP3S2-216ENST00000617003 1561 ntBASIC14.69□□□□□ -0.06
MBD3L3A6NE82 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 HLA-H-201ENST00000383620 1096 ntBASIC14.69□□□□□ -0.06
MBD3L3A6NE82 TREML5P-201ENST00000421694 576 ntBASIC14.69□□□□□ -0.06
MBD3L3A6NE82 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 AC018529.1-201ENST00000613063 361 ntBASIC14.69□□□□□ -0.06
MBD3L3A6NE82 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 AC073439.1-201ENST00000624121 1774 ntBASIC14.69□□□□□ -0.06
MBD3L3A6NE82 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MBD3L3A6NE82 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms