Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 AL603832.2-201ENST00000566195 2125 ntBASIC18.05■□□□□ 0.48
CTAGE9A4FU28 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 AC063926.3-201ENST00000624734 5658 ntBASIC18.05■□□□□ 0.48
CTAGE9A4FU28 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 AC010203.1-204ENST00000548782 407 ntBASIC18.05■□□□□ 0.48
CTAGE9A4FU28 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 AC005332.3-201ENST00000589904 676 ntBASIC18.05■□□□□ 0.48
CTAGE9A4FU28 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.05■□□□□ 0.48
CTAGE9A4FU28 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CTAGE9A4FU28 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 AL353593.2-201ENST00000602529 1483 ntBASIC18.04■□□□□ 0.48
CTAGE9A4FU28 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.04■□□□□ 0.48
CTAGE9A4FU28 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 AL137013.1-201ENST00000432946 1228 ntBASIC18.04■□□□□ 0.48
CTAGE9A4FU28 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 AC092597.1-201ENST00000487352 616 ntBASIC18.04■□□□□ 0.48
CTAGE9A4FU28 COX11P1-201ENST00000489116 835 ntBASIC18.04■□□□□ 0.48
CTAGE9A4FU28 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 AL390719.2-201ENST00000606993 987 ntBASIC18.04■□□□□ 0.48
CTAGE9A4FU28 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 AC005363.2-201ENST00000618631 242 ntBASIC18.04■□□□□ 0.48
CTAGE9A4FU28 AL031432.5-201ENST00000641059 760 ntBASIC18.04■□□□□ 0.48
CTAGE9A4FU28 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.04■□□□□ 0.48
CTAGE9A4FU28 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 AC125634.1-201ENST00000438758 1403 ntBASIC18.04■□□□□ 0.48
CTAGE9A4FU28 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTAGE9A4FU28 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.03■□□□□ 0.48
CTAGE9A4FU28 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms