Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 SNX33P1-201ENST00000592116 1762 ntBASIC15.8■□□□□ 0.12
TCRBV3S1A0A5B6 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 Z83836.1-201ENST00000624605 1642 ntBASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 MMP23A-201ENST00000234610 1017 ntBASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 ACTG1P4-201ENST00000425123 1122 ntBASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 TSPY20P-201ENST00000450910 630 ntBASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 AL031432.5-201ENST00000641059 760 ntBASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 AL671710.1-201ENST00000610245 2349 ntBASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 LINC02447-202ENST00000501888 2146 ntBASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TCRBV3S1A0A5B6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 AC097637.2-201ENST00000624096 1997 ntBASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 NUS1P1-201ENST00000446295 882 ntBASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 TSPY15P-201ENST00000457163 923 ntBASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 AC008550.1-201ENST00000511500 884 ntBASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 FAM45BP-202ENST00000592932 1624 ntBASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TCRBV3S1A0A5B6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms