Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC069148.1-201ENST00000608741 768 ntBASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC092119.3-201ENST00000612618 583 ntBASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC010491.1-201ENST00000563101 2797 ntBASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 SLC22A20-204ENST00000530038 1673 ntBASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV5-3A0A0A0MS03 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC087388.1-201ENST00000571370 1112 ntBASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 GPAA1P2-202ENST00000606848 1787 ntBASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-3A0A0A0MS03 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC131009.4-201ENST00000624048 1740 ntBASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 PMS2P1-201ENST00000431037 1228 ntBASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 POU5F1P6-201ENST00000466990 990 ntBASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 SLC25A6P2-201ENST00000497974 877 ntBASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-3A0A0A0MS03 AC138894.3-201ENST00000603787 634 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms