Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 TPSP2-201ENST00000561760 610 ntBASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 AC011840.4-201ENST00000578471 627 ntBASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4B1Q9Y6B7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 AC246785.2-201ENST00000432512 513 ntBASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 AC068472.1-201ENST00000474589 881 ntBASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 AC093525.9-201ENST00000624961 1746 ntBASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
AP4B1Q9Y6B7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 Z69720.1-201ENST00000601483 472 ntBASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4B1Q9Y6B7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
AP4B1Q9Y6B7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
AP4B1Q9Y6B7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms