Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 AC068472.1-201ENST00000474589 881 ntBASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 AC063952.2-201ENST00000498792 1227 ntBASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 KRT126P-201ENST00000549467 1181 ntBASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 AL031432.5-201ENST00000641059 760 ntBASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 FRMD8P1-201ENST00000440433 1524 ntBASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 HLA-F-220ENST00000434407 884 ntBASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 AC140113.3-201ENST00000605663 199 ntBASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 FAM45BP-202ENST00000592932 1624 ntBASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB1Q9Y5G3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 LINC02228-204ENST00000642115 2962 ntBASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB1Q9Y5G3 IGHGP-201ENST00000390555 1178 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms