Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC4Q9Y5F7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 AC006277.1-201ENST00000624348 1610 ntBASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 PC-204ENST00000524491 1714 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 AC040169.1-201ENST00000565382 521 ntBASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 MIR4492-201ENST00000581627 80 ntBASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC4Q9Y5F7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 AC078925.2-201ENST00000624013 1973 ntBASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC4Q9Y5F7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 HMGA1P7-201ENST00000406908 502 ntBASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGC4Q9Y5F7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms