Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHTOPQ9Y3Y2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AC007686.3-201ENST00000619017 3487 ntBASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AC026271.3-201ENST00000571884 352 ntBASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 MIR3180-4-201ENST00000582223 153 ntBASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 MIR6821-201ENST00000617625 74 ntBASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AC130371.2-201ENST00000619443 611 ntBASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 AL356585.2-201ENST00000625078 2396 ntBASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.19□□□□□ -0.46
CHTOPQ9Y3Y2 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 BX276092.7-203ENST00000637198 1536 ntBASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 KSR1P1-201ENST00000446298 240 ntBASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 AL031985.4-201ENST00000642138 673 ntBASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHTOPQ9Y3Y2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms