Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
NINLQ9Y2I6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
NINLQ9Y2I6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
NINLQ9Y2I6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NINLQ9Y2I6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC22.89■■□□□ 1.25
NINLQ9Y2I6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NINLQ9Y2I6 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.89■■□□□ 1.25
NINLQ9Y2I6 KLF2P3-201ENST00000451977 1087 ntBASIC22.89■■□□□ 1.25
NINLQ9Y2I6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
NINLQ9Y2I6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
NINLQ9Y2I6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.88■■□□□ 1.25
NINLQ9Y2I6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC22.88■■□□□ 1.25
NINLQ9Y2I6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 AC139713.2-201ENST00000641328 2723 ntBASIC22.87■■□□□ 1.25
NINLQ9Y2I6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC22.87■■□□□ 1.25
NINLQ9Y2I6 AL138918.1-201ENST00000568306 659 ntBASIC22.87■■□□□ 1.25
NINLQ9Y2I6 MIR6752-201ENST00000618442 71 ntBASIC22.87■■□□□ 1.25
NINLQ9Y2I6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 AL671710.1-201ENST00000610245 2349 ntBASIC22.86■■□□□ 1.25
NINLQ9Y2I6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 AC125807.1-201ENST00000483097 614 ntBASIC22.86■■□□□ 1.25
NINLQ9Y2I6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NINLQ9Y2I6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 TUBB3P1-201ENST00000405796 1332 ntBASIC22.85■■□□□ 1.25
NINLQ9Y2I6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
NINLQ9Y2I6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms