Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 KRTAP10-13P-201ENST00000412914 571 ntBASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 TIMM17BP1-201ENST00000545713 516 ntBASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 AL451050.2-201ENST00000606967 682 ntBASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIMBP3Q9UFD9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 AC006480.2-201ENST00000609770 1337 ntBASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 APOA2-204ENST00000464492 530 ntTSL 3 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC26.18■■□□□ 1.78
RIMBP3Q9UFD9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 UFM1-202ENST00000379649 846 ntTSL 4 BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 LINC01115-203ENST00000606068 577 ntBASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 AL096828.3-201ENST00000615354 462 ntBASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 RN7SL818P-201ENST00000485099 259 ntBASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 RPSAP36-202ENST00000494591 1261 ntBASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 MIR4741-201ENST00000579822 90 ntBASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 RN7SL725P-201ENST00000606439 259 ntBASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 AC026979.3-201ENST00000607315 403 ntBASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RIMBP3Q9UFD9 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 POR-209ENST00000439269 1858 ntTSL 2 BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 SDHD-202ENST00000525291 790 ntTSL 3 BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RIMBP3Q9UFD9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RIMBP3Q9UFD9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RIMBP3Q9UFD9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RIMBP3Q9UFD9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RIMBP3Q9UFD9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC26.15■■□□□ 1.78
RIMBP3Q9UFD9 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC26.15■■□□□ 1.78
RIMBP3Q9UFD9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms