Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLIP2Q9UDT6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLIP2Q9UDT6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 SLC25A1P3-201ENST00000395415 828 ntBASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 AC004967.1-201ENST00000453589 447 ntBASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 AC092183.1-201ENST00000469884 875 ntBASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 MIR4469-201ENST00000583919 79 ntBASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLIP2Q9UDT6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 AC211486.1-202ENST00000416371 468 ntBASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 AC211476.1-201ENST00000503899 468 ntBASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 YBX1P5-201ENST00000509441 847 ntBASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 AC107918.2-201ENST00000530817 355 ntBASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.97■□□□□ 0.79
CLIP2Q9UDT6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 EGFEM1P-202ENST00000431685 1563 ntBASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 AP001160.2-201ENST00000596071 487 ntBASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.96■□□□□ 0.79
CLIP2Q9UDT6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.95■□□□□ 0.78
CLIP2Q9UDT6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms