Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRTM1Q9HBL6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 AL356309.3-201ENST00000624132 1934 ntBASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRTM1Q9HBL6 AC092364.2-201ENST00000596710 2692 ntBASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 AC006277.1-201ENST00000624348 1610 ntBASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 AC026691.1-201ENST00000602502 2017 ntBASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 AC013467.2-201ENST00000605472 835 ntBASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 AL139424.1-201ENST00000607572 797 ntBASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LRTM1Q9HBL6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRTM1Q9HBL6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms