Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.83■□□□□ 0.12
AMBRA1Q9C0C7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AL391256.1-201ENST00000443260 1855 ntBASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AC023824.1-201ENST00000562945 2975 ntBASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AC005052.1-201ENST00000625181 2492 ntBASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AC068418.2-201ENST00000577309 3703 ntBASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AC073592.5-201ENST00000624854 528 ntBASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 AL356309.3-201ENST00000624132 1934 ntBASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AMBRA1Q9C0C7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 AC092384.3-202ENST00000564646 2873 ntBASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 TOB2P1-201ENST00000469761 992 ntBASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 AC233702.3-201ENST00000578656 1387 ntBASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 AP005901.3-202ENST00000581653 237 ntBASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.81■□□□□ 0.12
AMBRA1Q9C0C7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms