Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
CNTNAP4Q9C0A0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 AC093724.1-201ENST00000448659 1027 ntBASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 AC061975.2-201ENST00000581722 295 ntBASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 AL033527.5-202ENST00000641632 1098 ntBASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTNAP4Q9C0A0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 RAB43P1-201ENST00000561790 589 ntBASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 AC087289.5-201ENST00000586076 3175 ntBASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTNAP4Q9C0A0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 MIR658-201ENST00000385210 100 ntBASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 AC022210.1-201ENST00000449856 793 ntBASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CNTNAP4Q9C0A0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms