Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMSS1Q9BQ75 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMSS1Q9BQ75 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMSS1Q9BQ75 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.49□□□□□ -0.09
CMSS1Q9BQ75 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMSS1Q9BQ75 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.49□□□□□ -0.09
CMSS1Q9BQ75 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMSS1Q9BQ75 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMSS1Q9BQ75 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 FRMD8P1-201ENST00000440433 1524 ntBASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AP002490.2-201ENST00000524791 560 ntBASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AC005336.2-201ENST00000593183 939 ntBASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AC006011.2-201ENST00000621313 1158 ntBASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AC073912.3-201ENST00000624414 853 ntBASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AL353593.2-201ENST00000602529 1483 ntBASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 AC006449.5-201ENST00000610658 2098 ntBASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CMSS1Q9BQ75 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 DBET-201ENST00000630918 3363 ntBASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 SPDYE13P-201ENST00000445314 798 ntBASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 AC090616.6-201ENST00000582640 721 ntBASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 AL353801.3-201ENST00000609898 542 ntBASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 AC083849.1-201ENST00000615227 514 ntBASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.47□□□□□ -0.09
CMSS1Q9BQ75 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms