Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 NSUN5P2-203ENST00000457352 1529 ntBASIC19.58■□□□□ 0.73
CHAMP1Q96JM3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 AP000867.4-201ENST00000641616 219 ntBASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.58■□□□□ 0.72
CHAMP1Q96JM3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 KRT18P1-202ENST00000452408 1331 ntBASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 TOB2P1-201ENST00000469761 992 ntBASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHAMP1Q96JM3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 SPDYE21P-201ENST00000413323 827 ntBASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 IGHV3-47-201ENST00000425060 335 ntBASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 BX276092.5-203ENST00000456199 560 ntBASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 AL691432.3-201ENST00000621860 400 ntBASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms