Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 AF238378.1-201ENST00000526806 358 ntBASIC17.84■□□□□ 0.45
TRIM11Q96F44 MPDU1-223ENST00000582151 728 ntBASIC17.84■□□□□ 0.45
TRIM11Q96F44 CLEC4GP1-201ENST00000596555 870 ntBASIC17.84■□□□□ 0.45
TRIM11Q96F44 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 GGTLC5P-201ENST00000617623 998 ntBASIC17.84■□□□□ 0.45
TRIM11Q96F44 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM11Q96F44 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM11Q96F44 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM11Q96F44 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.83■□□□□ 0.45
TRIM11Q96F44 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRIM11Q96F44 AC006504.4-201ENST00000592118 1568 ntBASIC17.83■□□□□ 0.45
TRIM11Q96F44 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.83■□□□□ 0.45
TRIM11Q96F44 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM11Q96F44 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM11Q96F44 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM11Q96F44 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
TRIM11Q96F44 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRIM11Q96F44 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.45
TRIM11Q96F44 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM11Q96F44 UBALD1-205ENST00000590891 2641 ntBASIC17.83■□□□□ 0.44
TRIM11Q96F44 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 AC073648.2-201ENST00000510116 352 ntBASIC17.83■□□□□ 0.44
TRIM11Q96F44 IFNL4P1-201ENST00000607083 540 ntBASIC17.83■□□□□ 0.44
TRIM11Q96F44 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 REXO1L3P-201ENST00000622202 1288 ntBASIC17.83■□□□□ 0.44
TRIM11Q96F44 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM11Q96F44 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM11Q96F44 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM11Q96F44 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM11Q96F44 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM11Q96F44 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM11Q96F44 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
TRIM11Q96F44 CYP2T1P-202ENST00000641596 2535 ntBASIC17.82■□□□□ 0.44
TRIM11Q96F44 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM11Q96F44 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM11Q96F44 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM11Q96F44 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM11Q96F44 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM11Q96F44 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM11Q96F44 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM11Q96F44 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM11Q96F44 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM11Q96F44 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM11Q96F44 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM11Q96F44 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms