Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RNF183Q96D59 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF183Q96D59 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.58□□□□□ -0.4
RNF183Q96D59 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF183Q96D59 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RNF183Q96D59 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF183Q96D59 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
RNF183Q96D59 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF183Q96D59 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF183Q96D59 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF183Q96D59 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.58□□□□□ -0.4
RNF183Q96D59 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.58□□□□□ -0.4
RNF183Q96D59 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.58□□□□□ -0.4
RNF183Q96D59 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF183Q96D59 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.58□□□□□ -0.4
RNF183Q96D59 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF183Q96D59 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RNF183Q96D59 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RNF183Q96D59 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF183Q96D59 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.58□□□□□ -0.4
RNF183Q96D59 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.57□□□□□ -0.4
RNF183Q96D59 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RNF183Q96D59 PTCHD3P3-201ENST00000403073 906 ntBASIC12.57□□□□□ -0.4
RNF183Q96D59 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.57□□□□□ -0.4
RNF183Q96D59 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.57□□□□□ -0.4
RNF183Q96D59 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 PRSS29P-201ENST00000440800 595 ntBASIC12.57□□□□□ -0.4
RNF183Q96D59 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.57□□□□□ -0.4
RNF183Q96D59 AC108073.2-201ENST00000464002 357 ntBASIC12.57□□□□□ -0.4
RNF183Q96D59 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.57□□□□□ -0.4
RNF183Q96D59 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
RNF183Q96D59 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.57□□□□□ -0.4
RNF183Q96D59 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.57□□□□□ -0.4
RNF183Q96D59 AC064836.3-201ENST00000607928 673 ntBASIC12.57□□□□□ -0.4
RNF183Q96D59 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
RNF183Q96D59 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RNF183Q96D59 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RNF183Q96D59 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.57□□□□□ -0.4
RNF183Q96D59 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.57□□□□□ -0.4
RNF183Q96D59 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RNF183Q96D59 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.57□□□□□ -0.4
RNF183Q96D59 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.57□□□□□ -0.4
RNF183Q96D59 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
RNF183Q96D59 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF183Q96D59 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RNF183Q96D59 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 AC006116.8-202ENST00000587620 1550 ntBASIC12.56□□□□□ -0.4
RNF183Q96D59 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.56□□□□□ -0.4
RNF183Q96D59 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
RNF183Q96D59 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RNF183Q96D59 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.56□□□□□ -0.4
RNF183Q96D59 AL121761.2-201ENST00000598007 1648 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms